MXO03893.5prime Sequence
856 bp (788 high quality bases) assembled on 2007-07-18
> MXO03893.5prime
CAGTCGACATGAACGGACTGATTGTCTTTAACAGCGCCAACGATGTTGTA
TACCAGAAGCTTAACGAGCCGCTGGCGCAGAAGATCCGGAGTGTGGCCAC
CACCCAGGGCCTGCTCCAGTCCGGCGGCTCCCTGGACAGCAACATACTGC
TGCAGATTTTCAGCCCCATCGTTGGATCTCAGCGAATAATGCAGTGCCAG
TTCGATAATGCCTACTCCAGCCTGCAGTGTGAGCAAGGCTTCAATTTGGT
GTTCGGCGAACTTCTTGGCTTCACCTTTCTGAAGATCGGACAAATACCCG
TGGAGCTGCTGGGTCGCCAAATGGGTGTGGCCATTACGCTGACGCGCTAT
TGTTACGGCGCCAATTTGTTTGCCGCCCAGGCGGGGGCCATGCAACAGGA
GTTGCTGACGCAGTGCCTCGACTGCTATGAGACTTTGTTGTGGGAGGAGG
ATCAGACGTACCTGCTGGAGGCCATGCCCAGGCTGCTGATCAACACGGAA
CTAAAGAGGACAGTGCATCTGACGCTGGACGCCACGCTTGAGCACTTGCG
CCAGCTCGGACTGCCCCGAGCCCACGCCCTGTTGCTCGTTTCCAACAAGC
TGGTGGCCGCGAACAGCACTCGGCAAGCTCTGCCGCTTGCTGCCGCCGAC
CTACTCTTCCTCAGCCTCATGTCACGCGCCCTGCAAGCGCCAAAGTCCCC
TTCCCAGCGAGCAGTAGCTGTATTCCTGCAGGGTGTCTCCTATGATGTGA
ACTCTGGCTGCGTTCCCAGTATCGTGCACATCTCGCGTCTCCATGGTAAC
CAAGTTCTCCTGCAGGTCATCGAGTACGCCCACATGCCACTGACCAGCTG
CATCTA
MXO03893.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:58:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12855-PA | 1791 | CG12855-RA | 1..848 | 9..856 | 4215 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HPS1-RA | 2074 | CG12855-RA | 84..931 | 9..856 | 4225 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14855512..14856359 | 9..856 | 4225 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:07:42 has no hits.
MXO03893.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:58:38 Download gff for
MXO03893.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12855-PA | 1..847 | 9..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:16 Download gff for
MXO03893.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HPS1-RA | 79..930 | 2..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:09 Download gff for
MXO03893.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HPS1-RA | 79..930 | 2..855 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:09 Download gff for
MXO03893.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14855507..14856358 | 2..855 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:16 Download gff for
MXO03893.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10743012..10743863 | 2..855 | 99 | | Plus |