MXO03895.5prime Sequence
896 bp (715 high quality bases) assembled on 2007-07-18
> MXO03895.5prime
CAGTCGACATGGAGAGGCGAAGACCCCGAAAGTCCTCGCGTAAATACGTG
TGCTCCAAATCAAACTCTTCAGTTGGAGGAGGAGTAGAGGAAGACAGTGG
CTCATCATTGCCTGCCACCGCCAAAGCGTTACTCCTCCAGCCGGACGGTA
ATAAAGCACCAACCATGACATCCCTTCTGGGCGAACGACTCAGAAGAGTT
TCTCGCATCGCAAGAGCTCCGCACAGCCTACAAGTTACCGAAAATCCAGA
AGAAGGTGGAGCACCAATCGTACCACTAAGAGAATCCGGCGCATCGGAAG
TGTCAGAAGTAAATCCGGGGGTTATGGTCATTCCGGAGTCGGCCAGTCCC
CGGGGATCGGCGGTGCATGGACAACACGCTAGCTTGGTCTTCAGTGCTGA
AGCCAGGGATTCGGACAGTACGCGGATATCGGAGGAAATGGTGGAAGTGT
TCCAAACCTCTTCGGCGAGAACCACATCCAATGAGCCCGCAGGGGGCAAT
CTGCGCTTTGAAACCACTCCCGTGGCTGTAAGCGAAAGTATGGTTGGCAA
TATAAACTTCTCCCCGAACGCCATCTACGATCAGAACAGGTATAGCAGCA
TGATGTCCAACGGGGATTACAATAATGGCAACAGGGGTGAGAGTGAGAGG
AGCGTGGGAGCCTGCCACCATGGTTGGGCGGCGCGACAACAACAAGTTGC
CGCTGGACCTGCCGGCAGAGACACCCTGGGATTCGCCATCAGTCTGGGCG
CCGCTAATTTGGGCCAGAACCGATGCAGTCTGGGCGTTGCATGCGATGAG
GACTGTGGCTATGGAACTGGCTGTGATTTTGGATGCGGTCAAGCCCATGG
CGTTGATCCCGGAAGCTTTCTAAGTCCGGGAACCATGGGAACTGGT
MXO03895.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:58:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4955-PA | 1554 | CG4955-RA | 1..888 | 9..896 | 4390 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4955-RA | 1838 | CG4955-RA | 138..1025 | 9..896 | 4410 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17081584..17082471 | 9..896 | 4410 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:27:50 has no hits.
MXO03895.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:58:48 Download gff for
MXO03895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4955-PA | 1..888 | 9..896 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:01 Download gff for
MXO03895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4955-RA | 69..966 | 1..896 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:12 Download gff for
MXO03895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4955-RA | 128..1025 | 1..896 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:12 Download gff for
MXO03895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17081574..17082471 | 1..896 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:01 Download gff for
MXO03895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16975607..16976504 | 1..896 | 99 | | Plus |
