MXO03907.5prime Sequence
858 bp (781 high quality bases) assembled on 2007-07-18
> MXO03907.5prime
CAGTCGACATGGCTGCCGTACGCCGCTCCACGCGCCTTAGTAGCATCAGC
AAAGCGACCGCCGCCTCTCCGCTGCCGCCGTCGACGCAGACGCCGCGTCG
CTCGGAAGTTTGGAAACGCAGGCAGCCGAAAAAAGTGCTTGCCGATAGCG
ACGAGGAGGAGGAGGTGGTGACGGCGATCTATGACCTGACCAGCCCCGTT
TCAGAGAACAACGAGAACCGCAACGTGCTCAACAAAATGGACAAGATCTC
CAGGCGCAGGACATCGCAAGTGCAGGTGGCTCAATCGGAGCTGCCAAAGA
CGCCACGCAGCACAAAGAAAACAGTCCAATCAGCTGGCAGTTCACGGGCC
AAACGTGAGGAGGAAAACCGTGAGGCCACCGCTAGATTCTTGGAGGGCGA
ACAGGATTCGGAGGTGGACCCGCTTCATGGATCGCCGCCGAAGCAGAGGA
AGTTGCAGCCACTGCCACAGCACCTGATCAGTCCTTCGCGGCTGCTGGAC
AGACTCAGCATCGACGAGCGCCAGGAGGAAGAGGTGGAGGCGACCACACA
CAAGACTGAAACGGCTGAGCAGCAGCCGAAACATCAAGCCAAGGACGAGG
CAAAGCCTCGGCCAAAACAGCAGGAGGATCCATTAGCGCAAAAGCAGCAG
GAGAAACCTCCAACAAAGCAGCCGAATAAAAACCAAACTAAAGAAAAAAG
CAATATCCAAACCAATGAGGAAACCCAACAGAATAACCTGCCATCTCCCT
CACGCAACAAATACCAAAACGCCAGACGAGTGCTNCACAGCGCCGAGACA
CAAAACTTGCCAGGACGTGAGTCCCAGCTCCAAGAGCTACGTGAATTCTT
CAGCAATC
MXO03907.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:59:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5971-PA | 1989 | CG5971-RA | 1..850 | 9..858 | 4206 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdc6-RA | 2483 | CG5971-RA | 121..970 | 9..858 | 4224 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8633100..8633949 | 858..9 | 4224 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:59:59 has no hits.
MXO03907.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:59:11 Download gff for
MXO03907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5971-PA | 1..850 | 9..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:41 Download gff for
MXO03907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc6-RA | 119..970 | 6..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:27 Download gff for
MXO03907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc6-RA | 119..970 | 6..858 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:27 Download gff for
MXO03907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8633100..8633951 | 6..858 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:41 Download gff for
MXO03907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8626200..8627051 | 6..858 | 99 | | Minus |
