MXO03910.5prime Sequence
807 bp (758 high quality bases) assembled on 2007-07-18
> MXO03910.5prime
CAGTCGACATGGATACGAAGAATCCCCCGCCGGTGACGAGCAGCTATCAC
CACCAGCGGGCGCCGCGGACGCCGGAATCGTACTTCAACGTGCCGGAGTC
GGTGGCCCTGCTGAACATCGTCAAGTCGGAGCGCATCCAGAGCGCGTTCC
AGTCGAACCGAAAGAACCATGCCAGCGTGTGGGAGATGGTCGCCGAGGTG
CTCAACCGCTTCAGTGCGCGGAAGCGAACGGCCAAGCAGTGCTGCAATCG
GTACGAGAACCTCAAGAAGATCTACACGCAGCTGAAAAAGAATCCCGAGC
GCCATGTGCGCCGCAACTGGCCGTACATGTTCCTCTTCAAGGAGATCGAG
GAGCAGCGCGGCGAGTGCTGGGGATCGAATGGCAAGCGTCTGGCGCTCAT
AACCAAAAACCACAACGAGCTATCCTACTACCAGCGCCGACGGCAGGCGG
CCGAGCTGGGAGTGCTGCTCAACAAGGACAACCTCACCCCGCACCAGCAC
AGCCTACTGCAGAGCCTCAGCCAGAGCCAGAGCCAGAGCCACTCGCACGC
CCACTCCACGGACTCCTCGCAGAGCGGGAGCAAGCTGGACCGCTTCCTGC
CCAATCACTTTGTGGAGGCGCAGCTCAGCGAGGTGGCCGGCCCGGTCGGT
GGCTCCGCATCCGGTGTATCCGGCATGTCCGCCGGCGGCTTCGACGAGAA
TCCCCTCCAGATGCAGATGGTTCAGGCAGCTGCTGCCGCTGCCGCCGTGG
CCGCCCATAAGCGACATGAGCTCCAGATGGCCAGCGTTGGCGGCGTTCAA
ATGACGC
MXO03910.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:59:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14233-PA | 1662 | meso18E-RA | 1..799 | 9..807 | 3995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:03:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| meso18E-RD | 2619 | CG14233-RD | 503..1301 | 9..807 | 3995 | 100 | Plus |
| meso18E-RC | 2588 | CG14233-RC | 472..1270 | 9..807 | 3995 | 100 | Plus |
| meso18E-RB | 3096 | CG14233-RB | 980..1778 | 9..807 | 3995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:02:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19708354..19709150 | 807..11 | 3985 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:02:59 has no hits.
MXO03910.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:59:25 Download gff for
MXO03910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14233-PA | 1..799 | 9..807 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:09 Download gff for
MXO03910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| meso18E-RB | 980..1778 | 9..807 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:44 Download gff for
MXO03910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| meso18E-RB | 980..1778 | 9..807 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:44 Download gff for
MXO03910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19708354..19709156 | 1..807 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:09 Download gff for
MXO03910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19602387..19603189 | 1..807 | 99 | | Minus |
