MXO03916.5prime Sequence
853 bp (732 high quality bases) assembled on 2007-07-18
> MXO03916.5prime
CAGTCGACATGTCCAATGTAGGGAAAATAAAGATAAGATCCATTGCGGAT
CTGCAGGCCACAGTACGAGTAAATGTAGAACCGGACCCAACGCCCACGAT
CGAGAACAGAACGCCGGACAAGAAAAGAGCGGGAAGAACTCGTGCGGCTT
CCACGACAAAAAAGGTCCGACCAAAGACGGAAGCATGTCCAATCATAGCC
AGCACTGCGTTCAAGCGTTCCAGCAAGAAGACTCCGCTGCCAGGACAAAT
GCGCATCGATAGCTTTTTTACAAGTGCCGTCAAGAACTACAAAGTCAAGT
CAAGTTCCTCTTGCAGGAAGGTGGATCCTCCGTTGGACAAGCGAAAGGTA
TCTACCAAAGGGCGCAAGCGCCTCTTCGAGGAGTCTACAACAACCTCATC
TGCCTTTACGGGCAAGCTGGATGCAAAGCCGTCAGAGAAGCGAGTGCAGC
CTAGTCGCCGTGCGAAAGGCAAGGAGAACGCTAGCCTCTCCGAAGTGCAC
GTAATTGACCTGTGCTCCGAGGACGAGCAGACCATAAAAAGAAAGCCATC
CGCGATAGCCTCTCCCTGTGAAAAAAGCAGCGATGTCCAAGCAACCAAGT
TTAGAACTCCAGAGACTTCCATGCCAGAAGCCAAGCTAAGCAATTCCAGC
CTAGACCTAGTGGAAATCTCCCCCGGTCCCAACAAATCCCCAACGAATAA
CTTTTACCGGTCATCGCCGGCTGCAATCACAAAGGAAAGCCCCCTGGGGC
AAAACTCTAAAAAAGGAACTGTACGCAAACAAAGAAAACCAAAGCCTTGT
CCGCCCTATAAAGTAGTGGAGGGTACATCCTTCTGCGTCGACGGCTTTTC
AGT
MXO03916.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:59:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10018-PA | 2292 | Snm1-RA | 1..840 | 9..848 | 4150 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snm1-RA | 2589 | CG10018-RA | 52..891 | 9..848 | 4170 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5555135..5555974 | 9..848 | 4170 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:24:59 has no hits.
MXO03916.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:59:35 Download gff for
MXO03916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10018-PA | 1..844 | 9..853 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:18 Download gff for
MXO03916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snm1-RA | 48..895 | 1..853 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:51 Download gff for
MXO03916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snm1-RA | 48..895 | 1..853 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:51 Download gff for
MXO03916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5555131..5555978 | 1..853 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:18 Download gff for
MXO03916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1380853..1381700 | 1..853 | 99 | | Plus |
