MXO03918.5prime Sequence
760 bp (727 high quality bases) assembled on 2007-07-18
> MXO03918.5prime
CAGTCGACATGTCGCAGACCATGCCGCCAGAAAACCTAAGCAGCCGCCTG
TTGACGGTGCTCAGTTTGCCTCTATTCGAGCGCGTGCACGAGCTGAGCAT
CCTGTTCGATCGGTGCTCCTTGCGCCAAGTGCAGGAGATCTTCCCCCACG
TTGTGCACTCCATCTTCGGGATAGATGGCAATCCGTTGGGCTGGGGCCTG
CGGACCACGACGCTTGAAAACAATCCGGTGCAATTCCAAACGCTGCACCA
GTTCTTCGGCGTCTGTGGTCCCCTGATGCATGTTTGCCACCGTCTGCTCG
TCGACCAGTACAAATTCGAACTAGACATCAATCTGCTGCCGGCGAAATTC
GTTAGCCTGCTGCAGAATGGTCAGAATCCTAGTTTCTATGCAGAACTCAT
CAATGTGGAGACGATGATGCACCAGGTGTCCACGCTCTCGCTCAACGCCT
TCGACTTCTATGTGATTCACTTTGTGCTATATGCCCTGCAGCCACTACAC
TCTATCAATCCCATAGCCATGCAAATCCACAATGTGCGCAGCAAAACGGT
CTACTTGAAACTGGTGGCCGAGTACCTTAACAACTTCCTGCCGCTGCTTC
CCGATGCACGCATAGAACCGGTGCACTTTAGCAGCGGGGTTAAGGCGCCA
CAGCCATTGCCAGCCCAAGCATTACAGCCCCAAAGACAACCGCGCTACAT
TAAGATTCCCAGCTCCTATCGCAATGGTGGAAACGTGTCGGGCGGCGGTG
GCATTCCCAG
MXO03918.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:59:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6962-PA | 2304 | CG6962-RA | 1..752 | 9..760 | 3760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6962-RA | 2492 | CG6962-RA | 110..862 | 8..760 | 3765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11881563..11881982 | 760..341 | 2100 | 100 | Minus |
| 3R | 32079331 | 3R | 11882035..11882335 | 342..42 | 1505 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:40:33 has no hits.
MXO03918.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:59:44 Download gff for
MXO03918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6962-PA | 1..752 | 9..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:08 Download gff for
MXO03918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6962-RA | 103..862 | 1..760 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:29 Download gff for
MXO03918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6962-RA | 103..862 | 1..760 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:29 Download gff for
MXO03918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11881563..11881981 | 342..760 | 100 | <- | Minus |
| 3R | 11882036..11882335 | 42..341 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:08 Download gff for
MXO03918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7707285..7707703 | 342..760 | 100 | <- | Minus |
| arm_3R | 7707758..7708057 | 42..341 | 100 | <- | Minus |
