MXO03919.5prime Sequence
824 bp (770 high quality bases) assembled on 2007-07-18
> MXO03919.5prime
CAGTCGACATGGATCCCTCCGCGAGCCTGGCCGACAAGTTGGCCTCCAAG
ACTGCCAGCAGCAACTCTCTGGACAGCAGCTCCAAGTCCAGTTCGCTGGG
CTCCAAGCACGGTGGCGGAGAAAACGGCATTCTGCGGGACACGCCCTTCG
GCTATCTGGAGGGCGAAGAGGACCAGGACCAGAAGAACGACGTGACCTAC
GTGTGTCCGTACCGCGGCCCCGTCTTCGGCGCTCTTACCATAACCAACTA
CCGTCTGTACTTCCGGTCGCTTCCCCTGCGGGATCAGGAGCCGCCCGTCG
TCGTCGACGTGCCTCTGGGCGTGATCGCGCGTGTGGAGAAGATTGGAGGT
GCCACGTCTCGCGGTGAGAACTCGTACGGCATCGAGATTTTCTGCAAGGA
CATGCGAAACCTGCGATTCGCCCACAAGCAGCAGAATCATTCGCGGAGGA
CGGTGTTTGAGAAACTGCAGGCCAACGCCTTTCCGCTCTCGTACAGTGGG
CGCCTCTTTGCATTCGCCCACGCCGCGGCCAACTCTGTGAACGGTAACGG
AGGCTGGGACGGCTGGGCGGTATATGAACCGCTGGCGGAGCTGCGCCGCT
TGGGCGTTCCCAACGATATGTGGCGGGCGACCAAGCTAAACGAGTCCTAC
GCAATTTGCGACAGCTATCCGGCCGTGTGGGCTGTGCCCAAAGCGGCCTC
CGATGATTTCCTGAGGCGCGTGGCACAGTTCCGATCGCGCTGCCGCCTGC
CGGTTTTGTCCTGGATGAACCCACGGACTCAAGCGACCATTACAAGGTGT
TCCCAGCCGCTGGTGGGTGTAAGT
MXO03919.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:59:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9115-PA | 1860 | myotubularin-RA | 1..816 | 9..824 | 4080 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtm-RB | 2230 | CG9115-RB | 205..1020 | 9..824 | 4080 | 100 | Plus |
| mtm-RA | 2067 | CG9115-RA | 107..922 | 9..824 | 4080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6035996..6036811 | 824..9 | 4080 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:33:54 has no hits.
MXO03919.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:59:48 Download gff for
MXO03919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9115-PA | 1..816 | 9..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:00 Download gff for
MXO03919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtm-RA | 118..942 | 1..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:03 Download gff for
MXO03919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtm-RA | 98..922 | 1..824 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:03 Download gff for
MXO03919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6035996..6036820 | 1..824 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:00 Download gff for
MXO03919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6035996..6036820 | 1..824 | 99 | | Minus |
