MXO03923.5prime Sequence
651 bp (620 high quality bases) assembled on 2007-07-18
> MXO03923.5prime
CAGTCGACATGGACTTCGCTAGCGTACTCGGTAAGAGCGAGGCGCATCAG
CGCACCATTATCCACCTGGACATGGACTACTTCTGCGCTCAGGTGGAGGA
GATTCGGGATCCAACGTTGCGGTCGAAGGCCCTGGGCATTCAGCAGAAGA
ACATCGTGGTCACCTGCAACTATGTGGCGCGGGCCAAAGGAGTGACAAAA
TTGATGCTTATTGCAGAGGCACAGCGCATCTGTCCCGATTTGGTTCTTGT
CAATGGAGAAGACCTCGCCCCTTATCGGCAGATGTCGCAAAGAATCTTTG
ACCTCCTGCTTAACTACACTCCCCTAGTGGAGAAGCTAGGCTTCGATGAG
AACTTTATGGATGTGACTGCACTTGTAGAACTGCGACAGGCTCACGTTGC
TGAGGCCCTGTTGAGACCACCGGTGGGTCATACGTATCCGGCGGATGGTA
CTCCCTTGTCAAATTGCGATTGTGGCTGTGCCCAGCGGCTGGCCATCGGC
ACTCGGATCGCCCAGGAAATCAGGGAGGAGCTCAAGCTCCGGCTGGGAAT
TACCTGCTGCGCTGGAATCGCCTATAACAAGCTACTGGCCAAGCTAGTCG
GCAGTAGTCATGAGCCAAATCAGCAGACCGTTCTTGTTTCCACCTATGCA
A
MXO03923.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:00:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7602-PB | 2214 | DNApol-iota-RB | 1..642 | 9..650 | 3185 | 99.8 | Plus |
| CG7602-PA | 2214 | DNApol-iota-RA | 1..642 | 9..650 | 3185 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DNApol-iota-RC | 3144 | CG7602-RC | 85..726 | 9..650 | 3195 | 99.8 | Plus |
| DNApol-iota-RA | 2622 | CG7602-RA | 150..791 | 9..650 | 3195 | 99.8 | Plus |
| DNApol-iota-RB | 2544 | CG7602-RB | 72..713 | 9..650 | 3195 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8234266..8234907 | 9..650 | 3195 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:41:08 has no hits.
MXO03923.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:00:09 Download gff for
MXO03923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7602-PA | 1..641 | 9..649 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:22 Download gff for
MXO03923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DNApol-iota-RB | 68..712 | 5..649 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:45 Download gff for
MXO03923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DNApol-iota-RB | 68..712 | 5..649 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:45 Download gff for
MXO03923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8234262..8234906 | 5..649 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:22 Download gff for
MXO03923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4059984..4060628 | 5..649 | 99 | | Plus |
