MXO03945.5prime Sequence
675 bp (675 high quality bases) assembled on 2007-07-18
> MXO03945.5prime
CAGTCGACATGCGAGCCCAGGATCTGCTGCTGCTTGCCACCGCTTTAATC
GGCGCTTACCTACCGCTCACCGCCGCCTGTTCCTCGCGTGCCATCGCTAA
GCCGCGGCCAACAGCTGCACCGATCCTGCCGCCGGATAATGTGGAAATAT
CCACAACGCCGAGACCGAATGTCACCTTCCCGATCTTCGCCTGTCCACCG
ACCTATGTCGCCTGGTATTGCCTGAACGATGGCACCTGCTTTACGGTGAA
GATCCACAATGAAATCCTATACAACTGCGAATGTGCGCTGGGATTTATGG
GTCCGAGGTGCGAGTACAAGGAGATTGATGGCTCGTACCTGCCAACCAGG
AACCGTGTGATGCTAGAGAAGGCCAGCATTGTTAGCGGAGCAACGCTGGC
CCTTCTGTTTATGGCCATGTGCTGTGTGGTTTTGTATCTGCGACACGAGA
AGCTGCAAAAACAAAAGCTGCACGACAGCACCACAACCACAACGACCGAC
GGTGGCTGTCAGAACGAGGGCATGGACGAGGTGGATGGCTTGCGACCCTT
ACGTCCAGTGAGACGTCCCTTTGGACCCTGCCGCATCCTATCGCTGGAGG
AGGCCCACCTTCAAGCGAAAGCCTCCAATCGCCCCAGGCATTGCAACGAA
CTTTTGCGCGCAAGCTTTCTAGACC
MXO03945.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:01:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32179-PA | 654 | Krn-RA | 1..651 | 9..659 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Krn-RA | 1354 | CG32179-RA | 384..1034 | 9..659 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17649882..17650532 | 659..9 | 3255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:41:19 has no hits.
MXO03945.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:01:20 Download gff for
MXO03945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32179-PA | 1..654 | 9..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:43 Download gff for
MXO03945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Krn-RA | 375..1039 | 1..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:22 Download gff for
MXO03945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Krn-RA | 375..1039 | 1..666 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:22 Download gff for
MXO03945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17649877..17650538 | 1..666 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:43 Download gff for
MXO03945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17642977..17643638 | 1..666 | 98 | | Minus |
