MXO03950.5prime Sequence
419 bp (387 high quality bases) assembled on 2007-07-18
> MXO03950.5prime
CAGTCGACATGAGTGTTCTGGAACAGCTGGGTGCTCTAGATATCGGTACA
AATGAGCAGGTGGACGAAACGCTGCAGCGGATTGCCGACGAAGAGGCAAA
AGTTAACGAGAAACTGGAGTCGCTGCTGGCCAAACAATGCCAGATTGAGG
CCAAAATGAGTGGCATTGGGCGATCACTCAGCCTGCTTCACACGGTGGAC
AGCGATTCCAACAAGCTGAACGACCAGATCGTAAACACTGCCCAGTTGGC
CGAATCGGTGAGCGCCAAGGTGCGCCGTTTGGATTTGGCCAGGTGCCGTG
CCTCCGAGTGCCAGCAGCGGGTGCACGATCTGATCGACCTGCATCTGTGT
AGCCAGGGCGTGGTGAAGGCCATCGGCGAGGAGGACTACGAGAAGAGTGC
CACCCCCATTGCCCGCTTC
MXO03950.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:01:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7456-PA | 2331 | CG7456-RA | 1..411 | 9..419 | 2030 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7456-RA | 2666 | CG7456-RA | 126..536 | 9..419 | 2040 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10488030..10488355 | 419..94 | 1615 | 99.7 | Minus |
2L | 23513712 | 2L | 10488410..10488497 | 96..9 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:01:54 has no hits.
MXO03950.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:01:40 Download gff for
MXO03950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7456-PA | 1..411 | 9..419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:10 Download gff for
MXO03950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7456-RA | 119..536 | 1..419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:22 Download gff for
MXO03950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7456-RA | 119..536 | 1..419 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:22 Download gff for
MXO03950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10488030..10488353 | 96..419 | 99 | <- | Minus |
2L | 10488411..10488504 | 1..95 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:10 Download gff for
MXO03950.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10488030..10488353 | 96..419 | 99 | <- | Minus |
arm_2L | 10488411..10488504 | 1..95 | 96 | | Minus |