MXO03957.5prime Sequence
717 bp (635 high quality bases) assembled on 2007-07-18
> MXO03957.5prime
CAATCGACATGAAGGAGTGTCCTTATGGCGAAAAGTGCTACAGGAAGAAT
CCCATTCATTTTGGCGAGTTCTCCCATGCCCACCTTGATGCCATTTATGC
GAAGGGAAATGAATCGGGGGACTATGAGATACCAGCCAATTACTCCAGCG
AGATGATTCACACCCAGTTGAAGCTGCTGGAGAAACTGTTTCCCAAGCAG
GCAACCAACAAGGAACAGGAAGCACATTCCTCTAGCTCAAAACCAGCCGT
AACTGCTCCGGTTGCCAGTGGATCCTCGAGTTCTGGGTCCCTAGATACCA
ATCCCAGTGGATCGTCAGCCTCCGGGCCAGCTGCTTCCCAAGACACCTCA
AATCTGGCCAAAAAACAGAAGCTAAATGCCAAGAACATCAGAGATTATAT
TCCTGTGGTAATCGAAAAGGGAGGAATGGCCAAAAAGCTGGAGCGGGCAG
CTCCCTATAACATGTTCCTCACCGCGATCACGGACTCCAAGCCCACCCAC
TCGGAGCCATTGAGCATAACGCTGCAGGAAATCCTGGACGAAAGTCTCGG
CGAGATTGAGAGCACCGTCCAAATTAACTTTATGGTGGACATTGGCTGGC
TCCTGGGACACTACTACTTTGCCGGGATACTGGACAAGCAACTTTTGCTG
CTCTACGGCGACGAATCACCGGAGCTGCTTACCATTGCGAAGTTCTTGCA
GCAGGTCACGGCCATTC
MXO03957.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:02:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8825-PA | 1743 | gkt-RA | 1..709 | 9..717 | 3395 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gkt-RA | 2221 | CG8825-RA | 122..832 | 7..717 | 3465 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3160203..3160750 | 85..632 | 2740 | 100 | Plus |
| 2L | 23513712 | 2L | 3160071..3160148 | 7..84 | 390 | 100 | Plus |
| 2L | 23513712 | 2L | 3160810..3160895 | 632..717 | 340 | 93 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:34:35 has no hits.
MXO03957.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:02:09 Download gff for
MXO03957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8825-PA | 1..709 | 9..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:13 Download gff for
MXO03957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gkt-RA | 114..832 | 1..717 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:24 Download gff for
MXO03957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gkt-RA | 114..832 | 1..717 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:24 Download gff for
MXO03957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3160063..3160148 | 1..84 | 95 | -> | Plus |
| 2L | 3160203..3160749 | 85..631 | 100 | -> | Plus |
| 2L | 3160810..3160895 | 632..717 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:13 Download gff for
MXO03957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3160063..3160148 | 1..84 | 95 | -> | Plus |
| arm_2L | 3160203..3160749 | 85..631 | 100 | -> | Plus |
| arm_2L | 3160810..3160895 | 632..717 | 93 | | Plus |
