MXO03967.5prime Sequence
843 bp (823 high quality bases) assembled on 2007-07-18
> MXO03967.5prime
CAGTCGACATGAAAAAGGCGACTACTTCCGCGGCCGCCAAGTCTCAAGGC
AACAGCAAAATGCAGAAAAACGCAAATAACGGCACAGCTAAAGACAAGAA
GAAGCCCAATCTAGATAAAGAATCGAATGATTCCAATTCGGTATCTGATA
TGCTCGCCGTAACCAAGGACCAAGAGGTGCATGCCTTTTTCTCTAAATTA
TTCGACGATGACGCCGGTCCATCAACATCCAAAAAGACCCAGTCAGGGTC
AGCCGCAGCCGCTAAGACCGCAGATCGCAAGCGACGTCTTCAGGCCGAGG
CGGATGCCAACAATAATGATACCGGAAAAGCCGGTAAGTTGACCAAGGAA
TCGGAAGCTACTCAAGGAGCCAGGGCCACCAAACGCAAGCAAGCACGTAG
TCTGGGACTGGAGCGCACCTCGCCGATCCAGGTTAATGGCGCGGCTTTAG
CCTGCCCTTTGGTGCGCAAATCGCTGCCCCCAGGGGAGGCCAATTCCTGT
CCTCAGCCGCCCAAAAAGGACCCAGCAGCCGTGAACTCATTAGTTAAAAT
AATTAAGGCGGAACCCACCGAAGAGGGCAATAATAACAATGACGAAAAGG
AGACTGAAACAATAGAAACTCACAAAGCCGACAGCGTCGAAGAGGGTCGT
CGCGTCCTGCAGTGGATACTCTTTCCGGTCCAAACTAAAGTCTTCTTCAA
AGACTTCTGGGAGCACACCGCCTGCCTGGTGCAGCGCTCTAATCCCAAAT
ACTTTCAAAGTATGATATCATTCAAGATGCTTGACGAAATACTGATTCGC
CATCATTTGGACTTCACCGTCAACGTGGATGTGACCACTTTAC
MXO03967.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:02:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2982-PB | 1962 | CG2982-RB | 1..832 | 9..840 | 4160 | 100 | Plus |
| CG2982-PA | 1962 | CG2982-RA | 1..832 | 9..840 | 4160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2982-RC | 2242 | CG2982-RC | 125..956 | 9..840 | 4160 | 100 | Plus |
| CG2982-RB | 2246 | CG2982-RB | 129..960 | 9..840 | 4160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4319628..4320459 | 9..840 | 4160 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:46:01 has no hits.
MXO03967.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:02:50 Download gff for
MXO03967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2982-PA | 1..834 | 9..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:27 Download gff for
MXO03967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2982-RB | 122..962 | 1..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:20 Download gff for
MXO03967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2982-RB | 122..962 | 1..843 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:20 Download gff for
MXO03967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4319621..4320461 | 1..843 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:27 Download gff for
MXO03967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4213654..4214494 | 1..843 | 99 | | Plus |
