MXO03982.5prime Sequence
868 bp (808 high quality bases) assembled on 2007-07-18
> MXO03982.5prime
CAGTCGACATGGATTTGGACTGCGAGGGCGCTACAGCTTTGGCTGACGAC
TCAGGGCACTTTAGCTGCACTAGCGATGATGGAGTAGGAGATCCTGCTCA
GAAACCGGCGCCGCAGCCTGAACCGGACCAATCGATTTTTCTGGTGCGGC
AAGAGCTGCTTCGGACGCGCAGTGAGGTGCAAAGGCTCTTAAAATCGGAG
CAGTGGTACAAGCAGGAGCTTAAGTCCCAGAAGCACAGCAGGCTACAGAC
GCTAGAACGATTGTACGCACAGGAACGGAAGTATTTGATGGAGAACCAGA
AGCTGCAGCAAGAATCGATCCGCCTGCACACACAATGCGCCACTCTGGAG
AAGCAGCAGGAGCAGGGCTCACCATTTTCCCCTGGCTCATCGCCGTTTAA
AGCAGACTCGGAGTCACACGACTCCTCTTTTGAGGCCAAACAGCAGGAGG
CGCGCCTACGGGATCAGCGTCAGTTGATCGACGTGCTCCGAAGGCAAAAG
AAGATGCTTCTGGACGACATCCAGAGGATCAGTCTGGAACACGATGAAAA
ACTTTCGCAGTTGCAGCAAACTGTTGTCGGCATGGAGCTGGAGAGCAAGC
ACGTGACTGGAAAATGCAAGCAACTACTTGACCTTAAAAGTCAAATGGAG
CACCAGCTAGAGCTAAGAAGCACTACCCTACGCAGTGTCACCGCGGAGCG
TGATCAGCTGCGCCAAGTCATTGCTGAGCTTAACGAGACGCTGCAAACGC
AGGAGCATCTGTTAGCGCTAAAGGAACAGGAGTTCCTGGATTTGAAACAG
TACTACCAACAAAAGCTGAAACGGGAGAGTAGCATGGAAATTATGCACTC
TTATAGCATGAAATTTCA
MXO03982.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:03:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11248-PB | 2493 | CG11248-RB | 1..860 | 9..868 | 4300 | 100 | Plus |
| CG11248-PA | 2493 | CG11248-RA | 1..860 | 9..868 | 4300 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11248-RC | 2998 | CG11248-RC | 191..1050 | 9..868 | 4300 | 100 | Plus |
| CG11248-RA | 2989 | CG11248-RA | 182..1041 | 9..868 | 4300 | 100 | Plus |
| CG11248-RB | 2918 | CG11248-RB | 111..970 | 9..868 | 4300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21680307..21681166 | 9..868 | 4300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:28:10 has no hits.
MXO03982.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:03:37 Download gff for
MXO03982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11248-PA | 1..859 | 9..867 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:04 Download gff for
MXO03982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11248-RB | 111..969 | 9..867 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:20 Download gff for
MXO03982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11248-RB | 111..969 | 9..867 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:20 Download gff for
MXO03982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21680297..21681165 | 1..867 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:04 Download gff for
MXO03982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21673397..21674265 | 1..867 | 99 | | Plus |
