MXO03989.5prime Sequence
814 bp (787 high quality bases) assembled on 2007-07-18
> MXO03989.5prime
CAGTCGACATGCAAAGCATGCAACTTAGCCAAGTGCTGCTAATACCGCTC
CTGCTGGCCCTGGTGGCCACCAACGTAGGCTCTGCCAGCGAAGTTCCACG
TCCGCTGGGTGTTCCGCTGGCCAAGGCTTCACTGTACCAACCTCGGGCGG
GCGAAAACAGTTGGACCTGCTTGGATGGCAGCCGCACCATACCCTTCTCC
CACATCAACGACGATTACTGCGACTGTGCGGATGGAAGCGATGAACCTGG
CACTGCGGCCTGTCCGCAGGGCCAGTTCCATTGTGTGAACAAAGGCCACC
AGCCGGTAAATATACCCAGTTCGCAGGTGCAGGACGGCATCTGTGACTGC
TGCGATGGCAGTGACGAGTCAGAGACGGTCGGTTGCCCGAATACCTGCTT
GGAACTCGGAGCAGCGGCGGCTGTCCAAAGGCGGAATGCAGCGGAGCTGC
ACAAACGTGGAGCTGAGCGGCGACAGGAGATGATTACCCGTGGCAAGCAG
ATGAGGGCCGAGCGAGAGGCGCGCCGCCTTGAGCTAGATCAACGACGCAA
GGAACAGGAACTGCTGCGCGCCGAAAAGGAGCAGCTCAAGCAAACCGCTG
AGGCTCTAGAGGCAGAAGCCATTGAAATCTTTAAGGAGCAACAGCGCGAG
GTGGATGCTGACACCGCACAGGCGGAGCGGGAGCCGCAACAGATGCGCCA
AGAGGCCACGCTCACCTTTGTGCGCTACGACACCAACAAAGATGGCTTCG
TCGAAGTTACCGAACTGATGGTCGACATGAATCTGGACAGAGATCGCAAC
GGCGTGGTAACTGT
MXO03989.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:03:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6453-PA | 1647 | CG6453-RA | 1..806 | 9..814 | 4005 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6453-RB | 2045 | CG6453-RB | 150..955 | 9..814 | 4015 | 99.9 | Plus |
| CG6453-RA | 2255 | CG6453-RA | 150..955 | 9..814 | 4015 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17483353..17484158 | 814..9 | 4015 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:41:47 has no hits.
MXO03989.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:04:00 Download gff for
MXO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6453-PA | 1..806 | 9..814 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:03 Download gff for
MXO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6453-RA | 142..955 | 1..814 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:39 Download gff for
MXO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6453-RA | 142..955 | 1..814 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:39 Download gff for
MXO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17483353..17484166 | 1..814 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:03 Download gff for
MXO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17483353..17484166 | 1..814 | 99 | | Minus |
