MXO03992.5prime Sequence
862 bp (775 high quality bases) assembled on 2007-07-18
> MXO03992.5prime
CAGTCGACATGCTGGCGGGTATCAGCGAGAAAAGCTATGCGGCGGAGGCC
CGCTACACGAACTTCTACGCCGGCGGCGACATCGCCTGGAGCCCGAATGG
CCATCATCTTTACTGCCTCAATGGCTCAGCTGTAAACCAGGTGGATGTGC
AGACCTCCCAAATCCTAAATAGCTACGGCTTGTCTTCCCCGTCGGCGGAT
AACAAGAGGCCGGCGGAGCTGGACAATATCGATGTGGAGGAGGATACGAT
TACTTGCTTCGGGCTGTCACAGGAGCATCTGGTTACTGCCCATCGAAGTG
GCCTGCTTAGGCTGTGGCAGCTGGACACTGGGAAGCTGGTGAAGCTGTGG
AAGGCGCAGCACAAGGGACCAGTCATCCGAGTTGAGTTTAGTCCCTGCGG
CAGGCTTATCTGCACCAGCGGCGGTGCAGATGCCACACTGAGGCTGTGGG
ACTACTCGAACAACAGCTGTCTGGGTGCCCTCAAGGATTTCCCTGGTCCC
GCTTGGCTCCTCGTCTTTCATCCCAATGTGCTGCGCAAAGAGATCTACGC
CGGAGGTTCGGATAACACTGTCTATGCCTGGAACTACGAGACGAAGACAC
TTGTGCACAAGATGCGAGGTCACCTGTCGCAAGTCACCGGCTTGAGCTTT
AAGAGCAACGCGTCCGACTGCAATGAAATCGTGACTGTAAGCCGGGACAA
GGTTATGATCGTGTGGCAATTGCAGGAGCAGTTGGAAAGCAAGCAGTTGA
AGGTTCTTCCCTTGTACGATGAGCTTGAGGGAGTCGTGTACGCAGACGAG
GGACAACTGATAATCGTGGCGAGCGGATCGGGCAAGCTGCAACAGGTCGA
CCCTAAATCTTG
MXO03992.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:04:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1671-PA | 2364 | CG1671-RA | 1..854 | 9..862 | 4270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1671-RA | 2523 | CG1671-RA | 64..918 | 8..862 | 4275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9848208..9849037 | 33..862 | 4150 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:19:30 has no hits.
MXO03992.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:04:10 Download gff for
MXO03992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1671-PA | 1..854 | 9..862 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:02 Download gff for
MXO03992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1671-RA | 64..918 | 8..862 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:14 Download gff for
MXO03992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1671-RA | 64..918 | 8..862 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:14 Download gff for
MXO03992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9848124..9848150 | 8..34 | 100 | -> | Plus |
| 2R | 9848210..9849037 | 35..862 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:02 Download gff for
MXO03992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5735629..5735655 | 8..34 | 100 | -> | Plus |
| arm_2R | 5735715..5736542 | 35..862 | 100 | | Plus |
