MXO03993.5prime Sequence
772 bp (771 high quality bases) assembled on 2007-07-18
> MXO03993.5prime
CAGTCGACATGACCTCGTACGTGCGTGCCATGTACGACTTTACCGGGGAG
CCGGGCTCCTCGGAGCTCTCCATCGCGACTGGCGACGTGCTCTCGGTGAC
CCGGAGCGATGTGGGTGAAGGCTGGTGGGAGGGCAAGAATGCCCGTGGCC
AGATTGGCCTCTTCCCGGCTGCGTACGTGGAGGTGATGTCGGCGGCCGAA
GCCCAGAAGCTGAGCGCCAGTGGAGCGACGTCGGTGCCACAGGTTCCGGA
TCCCTTCGCCTCGCCCCCTTTGCCGCGTTACGATCAGACGGCGGATGATG
ATGGCAGCAACTGGGATGATGAGGACGATTGGAGCGACGACAATGACACG
TACTCGGAAATTGGTCCAGGTGGCCAGAAGTCTGCGGGACAGTCGGCTCG
CGCTGGCGGATTGTCGCATTCCACCAGTGACTACGATAACAAACACCTGC
CCATCGCGCCCAACGATGATACCCAATCACTGGCCTCCGTGGCTGGTGGG
ACTGGTGCTGCTGGCACCGTCAAAAAGGGCATGTTCGCCAAAAGTTCCGA
TTCATATATACTCGGCTTGTCCAGCACCAAGGAGAAGATACCCGAATGCG
AGATGGCCTACATTACACAGGTGGAGGACTCGATCTACCAGTGGACGCAG
AACCATTCGCCCTACTCCGTTGTGGTGGCCAGTCCCAAAAAGGAGTCCAA
ATTCAAGGGGATGAAGACGTTCATTGCCTACCAACTGACGCCTAGCTTCA
CAACATATCCGTGTCACGTCGC
MXO03993.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:04:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6757-PA | 1698 | SH3PX1-RA | 1..742 | 9..750 | 3710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SH3PX1-RA | 2146 | CG6757-RA | 143..907 | 9..772 | 3800 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9712931..9713685 | 762..9 | 3725 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:08:42 has no hits.
MXO03993.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:04:14 Download gff for
MXO03993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6757-PA | 1..765 | 9..772 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:48 Download gff for
MXO03993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SH3PX1-RA | 136..907 | 1..772 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:36 Download gff for
MXO03993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SH3PX1-RA | 136..907 | 1..772 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:36 Download gff for
MXO03993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9712933..9713692 | 1..760 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:48 Download gff for
MXO03993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9706033..9706792 | 1..760 | 99 | | Minus |
