MXO04016.5prime Sequence
589 bp (567 high quality bases) assembled on 2007-07-18
> MXO04016.5prime
CAGTCGACATGGAGGTGCTGAAGAAGGACGCCGCCCTGGGCTCACCCAGC
AGCGTCTTCTACTTCCTGCTGCTGCCCACGCTGGTGCTTTGGTACATCTA
CTGGCGATTATCGCGGGCTCACCTGTACAGGTTGGCCGGACGACTGCCGG
GACCACGGGGACTGCCCATCGTGGGTCATCTGTTCGATGTGATTGGACCC
GCTTCATCTGTTTTCCGAACAGTCATCCGCAAAAGCGCCCCTTTCGAGCA
CATAGCCAAGATGTGGATCGGGCCCAAGCTGGTGGTCTTCATCTACGATC
CGCGGGACGTGGAGTTGCTGCTGAGCAGCCATGTCTACATCGACAAGGCA
TCCGAGTACAAGTTCTTCAAGCCCTGGCTGGGCGACGGACTGCTGATCAG
CACAGGTCAAAAATGGCGATCGCACCGCAAACTGATTGCACCCACATTCC
ATCTGAATGTCTTGAAGAGCTTCATCGAGTTGTTCAACGAGAACTCGCGT
AATGTGGTGAGGAAACTGCGTGCGGAGGATGGTCGCACTTTTGATTGCCA
TGATTACATGAGCGAGGCAAACCGTGGGAGATTCTATTG
MXO04016.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:05:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11715-PA | 1725 | Cyp4g15-RA | 1..562 | 9..570 | 2810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4g15-RC | 2632 | CG11715-RC | 536..1114 | 9..589 | 2855 | 99.7 | Plus |
| Cyp4g15-RA | 2505 | CG11715-RA | 536..1114 | 9..589 | 2855 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11478384..11478583 | 208..407 | 1000 | 100 | Plus |
| X | 23542271 | X | 11477593..11477791 | 9..207 | 995 | 100 | Plus |
| X | 23542271 | X | 11479011..11479178 | 403..570 | 840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:02:15 has no hits.
MXO04016.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:05:27 Download gff for
MXO04016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11715-PA | 1..579 | 9..589 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:17 Download gff for
MXO04016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4g15-RA | 530..1114 | 1..589 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:32 Download gff for
MXO04016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4g15-RA | 530..1114 | 1..589 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:32 Download gff for
MXO04016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11477587..11477791 | 1..207 | 98 | -> | Plus |
| X | 11478384..11478581 | 208..405 | 100 | -> | Plus |
| X | 11479014..11479195 | 406..589 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:17 Download gff for
MXO04016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11372417..11372614 | 208..405 | 100 | -> | Plus |
| arm_X | 11373047..11373228 | 406..589 | 98 | | Plus |
| arm_X | 11371620..11371824 | 1..207 | 98 | -> | Plus |
