MXO04021.5prime Sequence
570 bp (569 high quality bases) assembled on 2007-07-18
> MXO04021.5prime
CAGTCGACATGGCCGAGGCGAATTTGGACAAAAAACCTGAGGTGAAGCCT
CCGCCGGGCCTTAAGGCCATCATAGACCACCTCGGGCAGGTGTACCCCAA
CCAGCCGAACCCGCTGCAGGTGACCACACTGCTCAAGTACTGGCTGGGCG
GTCAGGATCCGTTGGACTACATTAGCATGTACAACTATCCCGGAGATGTG
GATAGGAACGTTCCGCCGCACTGGCACTACATTAGTTTCGGACTCAGCGA
CCTACACGGGGACGAGCGAGTCCACTTGCGCGAGGAGGGCGTCACTCGGT
CTGGCATGGGGTTCGAGTTGACCTTTCGCTTGGCCAAAACAGAAATAGAG
CTAAAGCAGCAGATTGAGAACCCGGAAAAGCCCCAAAGACCGCCCACCTG
GCCGGCGAACCTGTTGCAGGCCATCGGACGCTACTGTTTTCAAACAGGCA
ACGGATTGTGCTTCGGAGACAACATCCCGTGGCGCAAGAGTCTGGATGGC
AGTACCACTTCCAAGCTACAGAACCTGCTCGTCGCCCAGGACCCGCAGTT
GGGCTGCATCGACACTCCCA
MXO04021.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:05:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6054-PA | 1407 | Su(fu)-RA | 1..562 | 9..570 | 2760 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(fu)-RA | 1596 | CG6054-RA | 31..592 | 9..570 | 2780 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12690877..12691438 | 570..9 | 2780 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:42:33 has no hits.
MXO04021.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:05:53 Download gff for
MXO04021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6054-PA | 1..561 | 9..569 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:52 Download gff for
MXO04021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(fu)-RA | 269..835 | 1..569 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:33 Download gff for
MXO04021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(fu)-RA | 25..591 | 1..569 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:33 Download gff for
MXO04021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12690878..12691443 | 1..569 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:52 Download gff for
MXO04021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8516600..8517165 | 1..569 | 98 | | Minus |
