MXO04025.5prime Sequence
685 bp (661 high quality bases) assembled on 2007-07-18
> MXO04025.5prime
CAGTCGACATGTCGTTTTCCAATGTCCTAATCATGCGACAGCCCGACGAG
GGCAAGTGCCACATTTGCAAGCGTGTCTTCTGTTGCGGCAAATGCCGCCA
GAAGCATCAGTTCAAAGCGCACGCCATTGCTGTGCGCGAGCCATTGGGAT
TGAGGTCTGCCGGCGGCGGTATCATCGAGCATCGCCATCAAATGGAGTCC
GGCGCGACCACCATCTATGTGTTCTGTCCGATCTGCGAGCGGCGTCCCCT
GCTGCTGCGCGAGGAGATGCACGGCGAGCTGCTGGCCCACATCGAGACCT
GCCACCTGCCGCTGCGATGCCGCAAGTGCCAGCGCAACTACACGCGCGTC
GATGACCTGCGGGAGTTCAGCAAGTGCGTGGACCAGCAGCAGAGCTGCAC
TGATGTCACCGGCGCCACGAAGACATCGAAGGCGACGCTAAAGAAGGCAG
CGAATAGCACCGCCATTTCAACGCAAACGTCGCCGTCCGTAACGCCCATT
TCACTGATCAACATGCGCTGGAAGGCCAAGAGCCGTGTCACCCACGAGGA
GTTCATCAGCGACAGCGTCTCCTCCATACGCAACCTGTCGTCGTTCAGCA
ACAGCTCCATTCGTCGCTCCATTGGCCAACTGGGCGTGAATCCGTCCGAA
ACGATGGAGAAGGGCAGGGTCATACGCTCGACGTC
MXO04025.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:06:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2707-PA | 2091 | fs(1)Ya-RA | 1..677 | 9..685 | 3335 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)Ya-RA | 2235 | CG2707-RA | 59..735 | 9..685 | 3355 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2724441..2725077 | 49..685 | 3155 | 99.7 | Plus |
| X | 23542271 | X | 2724344..2724386 | 9..51 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:59 has no hits.
MXO04025.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:06:12 Download gff for
MXO04025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2707-PA | 1..677 | 9..685 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:06 Download gff for
MXO04025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)Ya-RA | 53..735 | 1..685 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:41 Download gff for
MXO04025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)Ya-RA | 53..735 | 1..685 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:41 Download gff for
MXO04025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2724338..2724385 | 1..50 | 92 | -> | Plus |
| X | 2724443..2725077 | 51..685 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:06 Download gff for
MXO04025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2618371..2618418 | 1..50 | 92 | -> | Plus |
| arm_X | 2618476..2619110 | 51..685 | 99 | | Plus |
