MXO04036.5prime Sequence
254 bp (199 high quality bases) assembled on 2007-07-18
> MXO04036.5prime
TATGCAGTCGACATGGNCCNGCCTCCGGCTGCCTCGCGCTCGCTACATAG
CCAACAAGGCGGACAACCAGATTCTCTCAAAGAAACCGCCCAAAAGACCG
GGCCTAAATGGCAACAACAAGACGAAGGAAGCCACACCGGCCGGCAAAAA
AAAGGATAAGGATGCTAAAAAGCGCAACCAACCCACAAGTGGTGGTCAAG
AGAAGGGGCTTCCCAACCCCATAATGCCCAGTGTTCAGACCGCCTTCAAG
ACCT
MXO04036.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:06:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11851-PA | 1872 | CG11851-RA | 17..238 | 33..254 | 1110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:03:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11851-RA | 2363 | CG11851-RA | 119..351 | 21..254 | 1145 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:03:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25221707..25221859 | 21..174 | 720 | 99.4 | Plus |
3R | 32079331 | 3R | 25221917..25221997 | 174..254 | 405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:03:36 has no hits.
MXO04036.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:06:59 Download gff for
MXO04036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11851-PA | 1..238 | 13..254 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:28 Download gff for
MXO04036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11851-RA | 114..351 | 13..254 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:58 Download gff for
MXO04036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11851-RA | 114..351 | 13..254 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:58 Download gff for
MXO04036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25221702..25221859 | 13..174 | 97 | -> | Plus |
3R | 25221918..25221997 | 175..254 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:28 Download gff for
MXO04036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21047424..21047581 | 13..174 | 97 | -> | Plus |
arm_3R | 21047640..21047719 | 175..254 | 100 | | Plus |