MXO04043.5prime Sequence
803 bp (802 high quality bases) assembled on 2007-07-18
> MXO04043.5prime
CAGTCGACATGGGCGGCCACCACAAGAAGAACCTGCGTGCGGAGAAGGCC
AAAGTGAAGCTGAAGGGCGCCAAGCTGCCCAAGGGCCTGAACGTGACCAA
GACGGACTTCAAGGTGCGCAAAATTGAGATTCGGGAGCAGCTGAAGGAGT
CCTCCTACTCGGAAACGGGCCAGCGACAGTTCAATCTCAAGGAGACACTG
TCCCGTCTGAAGCATCATAGTGTCAAGTTCCGCACTGATGCACAGCGCAA
TGTGCGCGACTCCCTGAAGTCCGGCAATGCGGACCATTTAATTGGTCATC
TGAACGAGCTGTTCCAAGGAATTGCGGCCGGAGCTTTGGACATGGAGGGG
TCGGCGCGAAAGGAATCATTCAAGACCCTTGATGTTCTGCTAGAGGCACT
GCAGCCACAAGCAGTGGCGCCCTTCTTCCATGTCATAGCCACCTATTTGC
GTTGCGCCATGACTCACGTGCTGCCCGCCATCCAGGAGGACTCGCTGCTC
ATGCTCGACGTCCTACTGTTGCGCGTACCACCGGCTTTCTTGGCCGAGCG
GAGTGCCAGCACCATAATTTGGCAACTTCATCGACATGATCTCCCCGCGC
CCGCCACGACAACGAGCGTTCGAATCGAACGTTGACATTGAACCTGAGTC
AGGGCAAGCAGACGACTGTGAAGTGGCGCACCAAGGTGCTTATCCGTCTG
CAGCAGATCCTCAGCACGCTAGTCACCTCGAAGACGCCAAAGTCAGCCGC
TGCCCGTGTGGTTCACTTCGAGGAGATGCGTCCGCAATATTACAATGTGC
TGT
MXO04043.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:07:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1575-PA | 1914 | CG1575-RA | 1..561 | 9..569 | 2805 | 100 | Plus |
| CG1575-PA | 1914 | CG1575-RA | 584..793 | 594..803 | 1050 | 100 | Plus |
| CG1575-PA | 1914 | CG1575-RA | 560..586 | 569..595 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1575-RB | 2053 | CG1575-RB | 47..839 | 9..803 | 3925 | 99.7 | Plus |
| CG1575-RA | 2119 | CG1575-RA | 113..905 | 9..803 | 3925 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8117124..8117916 | 9..803 | 3875 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:00:51 has no hits.
MXO04043.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:07:31 Download gff for
MXO04043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1575-PA | 1..793 | 9..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:16 Download gff for
MXO04043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1575-RA | 113..905 | 9..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:59 Download gff for
MXO04043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1575-RA | 113..905 | 9..803 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:59 Download gff for
MXO04043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8117124..8117916 | 9..803 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:16 Download gff for
MXO04043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8011157..8011949 | 9..803 | 99 | | Plus |
