MXO04045.5prime Sequence
912 bp (809 high quality bases) assembled on 2007-07-18
> MXO04045.5prime
CAGTCGACATGTACGCCCTGCTTCGCCGCTTTGCCGGCGTCACCAACTTG
GGATGTCCCATCAGAACCTACGCCTCCCTTACGCCCAGAGATGTATTGCG
GAGCAGCGATGAGACCGGCACACTGCTGACCCGCTTCGCCAAGCACATTG
CACTGGAGCGCTACAGGGATTCGGATCACGTGTTGCCCAAGACGACGGTC
CGGTACTCTGACTTCTTTCCCATCACGGACGACCGGTACTTTCAGCGGAC
GGTAGAGAAAACGGATGCAGCCCAATTGCCCGCCCTGATCATCCAGGCAT
CCAGCTATCGCTCCAATGCCGCTGTACCCATGTATGTGACTGCGCTTAAC
ACGTTGGATAACCATGCGGCTAAACAGCTGGACAAGATGGATACCGCCAC
AGTGCTCGAGACGCTCTACTCCTTTCTATTCCTCATACCAAGTTGGATAA
AGCGATTGGATTTTTACCAAGCAGCCATGCAACGACTGGTCAGGGAGGAT
TTTCGCGGCAACAAGGAGCGATTCGTTCAGGTGTGCTTCTATATGGGATT
GCAAAAGAAGCAGGCCAAATCCTTCTGAGGAATTCCAGCAACTCCTGGGA
AGAGCATCTACAAACGCATTTGCCTGAACTAAATGAAATGGACCTTGCCG
TGGTCAGCAATGCGGCGTACAAAACCTCAACTTTGGTAACCGGTGAGGCG
AAAACGGCATACGAAGCAAGACTCGTTAATGCCATATTAAATCTGGAGAT
AAACACCGGAAGCGATGCCTTGCTGGTCTCCTTTGTCAAGGCATTGCGTC
TGCAGCAAGTCAAAGATGAACGAGTGTGCCAGCACCTGCAAGATATCTGT
CTGGATCCTGTAAAGATAACCCATATTGAACCCCGAGGACTTGCCCATAT
CTTTGCATTCTT
MXO04045.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:07:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4619-PA | 1713 | CG4619-RA | 1..563 | 9..571 | 2815 | 100 | Plus |
| CG4619-PA | 1713 | CG4619-RA | 588..902 | 598..912 | 1575 | 100 | Plus |
| CG4619-PA | 1713 | CG4619-RA | 563..589 | 572..598 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4619-RB | 1923 | CG4619-RB | 98..1003 | 5..912 | 4475 | 99.7 | Plus |
| CG4619-RA | 4136 | CG4619-RA | 98..1003 | 5..912 | 4475 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9938960..9939865 | 5..912 | 4425 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:47:32 has no hits.
MXO04045.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:07:41 Download gff for
MXO04045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4619-PA | 1..902 | 9..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:18 Download gff for
MXO04045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4619-RA | 94..1003 | 1..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:08 Download gff for
MXO04045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4619-RA | 94..1003 | 1..912 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:08 Download gff for
MXO04045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9938956..9939865 | 1..912 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:18 Download gff for
MXO04045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9938956..9939865 | 1..912 | 99 | | Plus |
