MXO04069.5prime Sequence
612 bp (610 high quality bases) assembled on 2007-07-18
> MXO04069.5prime
CAGTCGACATGGCTGTTGCAAAGAAGGAAAAATTTGAGGCAAAAAAGAAA
AGCCCTGAAAAGGGAAAACAGCAGAAAGCCAAAGTTGTTCCTGTCACACC
GCCACCAAATGTAAAACAACGAACTGTGGTCACTCCTTGGCGAGACACGC
TGGAATTTAATACAACGTACAAATGGTTGTTTGGCAAGTCCAACACACCA
GCCACATGGCGTCAAGCGCTCAGTAAAATCCGCATTTGGTGTCTGCGAAG
AGGAAGTCTCTGCCCGGCAGCGGTTTTGGCCACATCGGTGCTTGTTCAGG
CGCACTTGGAGGACCAGGAGGGCAGCGCCAAAATACAGGACACCTATGCC
AGTGCCTTTACACGATTCTACAACTTTATGTCCTCCATTATCCAGGGACA
CAACATGTCCAGCATGTATGAAACGGCCAAGGAACTGGGCCTCCAGTCGT
TCATCGTTGATCTGCGCCACTTGTGCGCCCATGGACAGGAGCTGCCGCCT
GTGGAGGTGCTGAGAAACACCTCGAATCATTGTCTGGAGTGGCTGCGCAC
CTACTACTGGTTGCCACACATGGAAACCATGTCCAATTTGGATGCTGGCA
AACTGCATCGCA
MXO04069.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:09:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32075-PA | 1626 | CG32075-RA | 1..604 | 9..612 | 3020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32075-RB | 1751 | CG32075-RB | 77..681 | 8..612 | 3025 | 100 | Plus |
| CG32075-RA | 1955 | CG32075-RA | 281..885 | 8..612 | 3025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11063998..11064461 | 612..149 | 2320 | 100 | Minus |
| 3L | 28110227 | 3L | 11064520..11064661 | 149..8 | 710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:28:30 has no hits.
MXO04069.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:09:15 Download gff for
MXO04069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32075-PA | 1..603 | 9..611 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:10 Download gff for
MXO04069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32075-RA | 273..884 | 1..611 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:29 Download gff for
MXO04069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32075-RA | 273..884 | 1..611 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:29 Download gff for
MXO04069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11063999..11064461 | 149..611 | 100 | <- | Minus |
| 3L | 11064521..11064666 | 1..148 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:10 Download gff for
MXO04069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11057099..11057561 | 149..611 | 100 | <- | Minus |
| arm_3L | 11057621..11057766 | 1..148 | 97 | | Minus |
