MXO04074.5prime Sequence
817 bp (766 high quality bases) assembled on 2007-07-18
> MXO04074.5prime
CAGTCGACATGAATCGGGTGAAAAGAATATCTAATTACTTTGACTCTATG
CTACCCCTGATCGATAATATTTTGCAAGTAGTGAATCAGATCTTCGATGA
TTACACTTCCTTTGATGGCCAAAAGCTCATGCACTTATACCACCTCATTT
ACAAGCAGTGCGCGGCGGAGCGCAATTGGAATAATCCAGCCCAGAAGAAC
GGGAGAAGTCTTTACATTGTGCTATCCGACTGCCTGATGAAGCGACTAAA
AAACATAGCATGGGTAATGGAGAACCAACTCGACGACAACAAACCAATTC
GACTGATCGCCAAATATTTAGAGCACTGGGTACCCTATCAAAGGTCATGT
GAGAAACTGAACCTAGCTTGCTACCACTTCAACCGCAACTGGGTGGAACG
GGAGCGGCTTAAGGGAGACAAAGAAACTTATCCGATATATCGCTTGGCCA
TGATTAGCTGGAAGGAGCTGGTCTTCGAGCCCAGCGTCACGATTCTCGCC
GCCATTAGGCTGATTTTGAGTCAGATGCCCAGGGAATACAATAAATCATT
GGAATACCAAGTATACCAGGTGCTCCAATCCATTGTGGAACTGTACGCCA
ACGATAAGTACCAAGATGTGTCCTTGCCTTCTAGGATAGACAAAATTTTC
ACTGAGAAGGTGATGGATTTCTACAAGTCAACGACGTTGCACGAATTCCA
AAAGATCGTCGTATCCAATGACTACAAGGATTTCAAGCATTTCCTTAGGT
ACGCATGCCTAGCCATGCCATAAATTGAGAATGGGACACAATTTAAGGCA
ATACTAAAAAGATACCT
MXO04074.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:09:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11261-PA | 2013 | CG11261-RA | 1..809 | 9..817 | 3995 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:49:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11261-RA | 2215 | CG11261-RA | 117..925 | 9..817 | 4015 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:49:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13010761..13011569 | 817..9 | 4015 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:49:41 has no hits.
MXO04074.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:09:34 Download gff for
MXO04074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11261-PA | 1..809 | 9..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:40 Download gff for
MXO04074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11261-RA | 112..925 | 1..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:13 Download gff for
MXO04074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11261-RA | 112..925 | 1..817 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:13 Download gff for
MXO04074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13010761..13011574 | 1..817 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:40 Download gff for
MXO04074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13003861..13004674 | 1..817 | 99 | | Minus |
