MXO04093.5prime Sequence
851 bp (746 high quality bases) assembled on 2007-07-18
> MXO04093.5prime
CAGTCGACATGCAGCGCGATAGGGACTCATCCGGCTCCAACGCCCGCAAG
GGCAACCGCCCACCGGGTCTCAGGGGCAAGGACATCGGTTTGTACTATCG
CAATCTTGCCCGGCAGCAAAAGAAGGACAGAGGCGAGAATGCGGAATCAA
AGGAGCCGCAAATCCGCTTGGGCTGCAATGTCAGTGCTCCCAGTGGAGTG
CTTGAGCGTGTGAAGGAGTTAATGGAGGACTACAGCCGGGCACCGTCCAG
ACAAAATGTGGATGACAAAAATGTGGATGCCAAATTTCAGCAACAGTTTC
GCCATCTTTTGAGTGTAAACTTTGAGGAATTCGTTGCGGAGACCAAGGAA
CGGAACGCGGACTTAGACTGGGTAAACCCCAAGCTGGACGAGAGACTGCA
GCTGGAACTGGGGCAACGCCAGTTGGAGGAGAATGCCAAGAAACGGCTAG
AAGCACGGAAAAAACTGCCCACCATGAAATACGCCGACGATATTATCCAG
GCTGTGCGGGAAAACCAAGTAATACTCATTGTAGGAAGCACTGGATGTGG
CAAGACCACTCAGGTGCCTCAAATCCTCCTCGACGACGCCATTTCCCGCG
GATGTGCCTCGTCGTGCCGCATCATTTGCACTCAGCCACGAAGGATTTCA
GCCATCGCCATTGCCGAGTGGGTGAGTTACGAGCGCTGCGAGAGCCTGGG
CAATTCGGTAGGCTACCAGATTCGCCTAGAGAGCAGGAAGGCCAGGGAGA
GAGCCTCCATCACTTACTGCACCACAGGCGTTCTACTGCAGCAGCTTCAA
TCGGACCCACTGATGCACAATCTAAGTGTCTTAATCCTGGATGAGATCCA
C
MXO04093.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:10:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9323-PA | 2829 | CG9323-RA | 1..843 | 9..851 | 4215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9323-RB | 3125 | CG9323-RB | 204..1046 | 9..851 | 4215 | 100 | Plus |
| CG9323-RA | 3019 | CG9323-RA | 98..940 | 9..851 | 4215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20756940..20757782 | 851..9 | 4215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:51:17 has no hits.
MXO04093.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:10:59 Download gff for
MXO04093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9323-PA | 1..843 | 9..851 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:56 Download gff for
MXO04093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9323-RA | 94..940 | 1..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:32 Download gff for
MXO04093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9323-RA | 94..940 | 1..851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:32 Download gff for
MXO04093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20756940..20757786 | 1..851 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:56 Download gff for
MXO04093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20756940..20757786 | 1..851 | 99 | | Minus |
