MXO04103.5prime Sequence
778 bp (665 high quality bases) assembled on 2007-07-18
> MXO04103.5prime
CCTTTTGGGGAGTTATCAGNNCGAATGGATACCAANGAGCGACCTCAGGT
TTGGAAGCTAATCCGTCATCCTTTGCTCATCGTAGAGCAGTTAGTGATGA
ATGCTCGCTTTGAATTGCTGGGAAAGCTACTAGATGCGGCTCGTTCCAAG
TTGCTAAAGGAGAGACCACTTGGACCATGTCCGTACTGTTTTGACAAAAC
GGGCCATGTCTATGATGTCCAGTCCAGTGCTGGTTTAGGAAGTGGAGCGG
GAGAAACACCGGCAAAGATACGTTTTCAACTGGGACAAACAACATCCGAG
GCTTTTATTCTGCTCAACTTCAATTCCTACCAGCAGGATCACTTTGTGGG
TCAGGATTGTTTGGACCTATTACTGCGAATTTACGCCAGCAAAGCTCTGG
ACTACCATGTGGCGAATGTGCGTGCTGCTTCTGAGCCCAGTTCTCTTGGC
ACAGATGTACATAATTCACTGGACTCTCTTTGTGGTGCCTTCGTGATGCC
CAAGCAAGCACCCAACCGACAGCAGTGGACGCGGGACGAGGAGGCCAGCC
ACTGCATGTGCTGTCGCCGAGCAGCATTCACTATGTTGATGCGGAGACAT
CATTGCCGTAGGTGCGGGCGGGTGGTATGCTACGCCTGCTCCACCCATCG
AATACGCATCCCAGAGCTTTACGACGAGTTGGAGGTGCGGATCTGCAACG
ATTGTGCAGCGTGCAGCACGCCTGCCAAGGATCAGGGTGATGGCACTTCT
AGTGAGCGGAGTGCTATCTCGGGACAAG
MXO04103.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:11:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5270-PB | 6732 | CG5270-RB | 3819..4573 | 24..778 | 3656 | 99.3 | Plus |
| CG5270-PA | 2913 | CG5270-RA | 1..754 | 25..778 | 3651 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5270-RB | 7465 | CG5270-RB | 4122..4876 | 24..778 | 3704 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11426393..11427147 | 24..778 | 3704 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:37:11 has no hits.
MXO04103.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:11:24 Download gff for
MXO04103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5270-PB | 3819..4573 | 24..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:00 Download gff for
MXO04103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5270-RB | 4122..4876 | 24..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:39 Download gff for
MXO04103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5270-RB | 4122..4876 | 24..778 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:39 Download gff for
MXO04103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11426393..11427147 | 24..778 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:00 Download gff for
MXO04103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7252115..7252869 | 24..778 | 99 | | Plus |
