MXO04111.5prime Sequence
843 bp (727 high quality bases) assembled on 2007-07-18
> MXO04111.5prime
AGAGGCCCTATCAGGCGANANGAANGAGAAGAGGGGCCATGATAAGGGCG
AACGGCTGCGCAACTATATCCTGCGACCGGAGCTGTCCCTCCACAATCCC
CTGCCGGATGTTTTGCCCCGCAAATTCGATCCGATGCGCCTGTTGCATGC
GCCCCGTTGCCCGGGAAGCACTAAGTTGGCTCCTCGCCGCGACCAGAGTG
GTCACATACTTGAGTTCGTGGAATTGGACTTGGAGGCCGTGGGCGCCAAT
GCCAACAACTCGATGTCCATGCAGCGGGAGCCGGGCTTGCTGGAAGACGC
GACGCGTGGCTCCCACTCCAATTTTCCCTTTTGGCCAGGCGGTTTCGATG
AGCAGCGCCAGCAGATCGCAGCTCTGGATGTCAGCAACTTTCAGTTCGGG
GACAAGCTGCTAACGGTGCCACCGGGCTTCAGCTCTGGCTACGACTTCTT
CCAATCGCAATCTGTAACACTGCCGCCTGTGGTCGCCGATCCCAGTAACG
TTGATCTATTGGAAAACCTAGAACAGGATCTGGACGTCCAGGAGTGGATG
AAGCTTACGCGTAGTGAGGAAACAAGCTCCACTGGAACGCCTAAAAGTCC
AAAACAGTCGAACGTGCAATTACCTTCAGAGGAGTTCAGAGACGTGGACG
ATCACATTATGAAGGCTGACCTAAAGCCTGTGCTAAACATTTCCACCACA
ACCAAGAACTTCAAGAGCGATTGGGCCGAAATGGTGGACATAAGCCAACC
CATCAATAACTTTAAAGAGCAGATACCATGCCCCGCCATGGATTTCCCCT
TCGAACTGGATGTCTTTCAAAAGCAGGCCATTCTCAAGCTGGA
MXO04111.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:11:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10210-PA | 3594 | tst-RA | 30..824 | 49..843 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tst-RB | 3821 | CG10210-RB | 100..921 | 22..843 | 3994 | 99 | Plus |
| tst-RA | 4332 | CG10210-RA | 100..921 | 22..843 | 3994 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23771939..23772760 | 843..22 | 3994 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:27:34 has no hits.
MXO04111.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:11:50 Download gff for
MXO04111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10210-PA | 13..823 | 32..842 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:06 Download gff for
MXO04111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tst-RA | 110..920 | 32..842 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:07 Download gff for
MXO04111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tst-RA | 110..920 | 32..842 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:07 Download gff for
MXO04111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23771940..23772750 | 32..842 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:06 Download gff for
MXO04111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19597662..19598472 | 32..842 | 99 | | Minus |
