Clone MXO04128 Report

Search the DGRC for MXO04128

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:41
Well:28
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptOsbp-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO04128.5prime Sequence

642 bp (569 high quality bases) assembled on 2007-07-18

> MXO04128.5prime
CCCTCTAGGGGAGTTATCAGTCNANATGANAAANGCCGCTGGCCTTGCGC
TGGCCGAGAAGGGCCTACCGGAGATGAAAGGCTGGCTGCTAAAGTGGACC
AATTACATCAAGGGCTACCAGCGGCGATGGTTCGTGCTATCCAAGGGCGT
GCTGAGCTACTACCGCAACCAGTCGGAGATTAACCACACGTGCCGGGGCA
CCATATCGCTTCACGGAGCCCTCATCCACACGGTCGATTCGTGCACGTTC
GTAATCTCGAACGGCGGCACCCAAACGTTCCACATCAAGGCCGGTCACCG
AGGTGGAGCGCCAGTCGTGGGTCACCGCCCTGGAGCTGGCAAAGGCTAAG
GCAATCCGGGCCATCGAATGCGAGGAGGAGGAGGAGACGGAAACGGCACA
TGTGGTGCCCAGCCAGGAGATCAGCTCGGTGGTCCGAGATCTCACCGATC
GGCTGGAGAGCATGCGTACCTGCTACGACCTGATCACCAAGCATGGCGCA
GCCTTGCAGCGCGCTCTCAACGATCTGGAGACGAACGAGGAGGAGTCGCT
GGGCAGCCGCACGAAGATCGTTCACGAGAGGGCGACCCTCTTCCGGATAA
CCTCCATGCGATGATCAACGCCGGCAACAACTTACCTGCACA

MXO04128.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:12:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG6708-PA 2355 Osbp-RA 270..580 296..606 1505 99.3 Plus
CG6708-PA 2355 Osbp-RA 21..269 46..294 1245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
Osbp-RA 3248 CG6708-RA 373..979 35..642 2895 98.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24937253..24937850 632..35 2820 98.8 Minus
Blast to na_te.dros performed 2014-11-28 19:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsub\bilbo 5540 Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). 1262..1306 237..193 108 71.1 Minus

MXO04128.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:12:58 Download gff for MXO04128.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6708-PA 1..615 26..641 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:35 Download gff for MXO04128.5prime
Subject Subject Range Query Range Percent Splice Strand
Osbp-RA 364..978 26..641 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:02 Download gff for MXO04128.5prime
Subject Subject Range Query Range Percent Splice Strand
Osbp-RA 364..978 26..641 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:02 Download gff for MXO04128.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24937245..24937859 26..641 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:35 Download gff for MXO04128.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20762967..20763581 26..641 98   Minus