MXO04128.5prime Sequence
642 bp (569 high quality bases) assembled on 2007-07-18
> MXO04128.5prime
CCCTCTAGGGGAGTTATCAGTCNANATGANAAANGCCGCTGGCCTTGCGC
TGGCCGAGAAGGGCCTACCGGAGATGAAAGGCTGGCTGCTAAAGTGGACC
AATTACATCAAGGGCTACCAGCGGCGATGGTTCGTGCTATCCAAGGGCGT
GCTGAGCTACTACCGCAACCAGTCGGAGATTAACCACACGTGCCGGGGCA
CCATATCGCTTCACGGAGCCCTCATCCACACGGTCGATTCGTGCACGTTC
GTAATCTCGAACGGCGGCACCCAAACGTTCCACATCAAGGCCGGTCACCG
AGGTGGAGCGCCAGTCGTGGGTCACCGCCCTGGAGCTGGCAAAGGCTAAG
GCAATCCGGGCCATCGAATGCGAGGAGGAGGAGGAGACGGAAACGGCACA
TGTGGTGCCCAGCCAGGAGATCAGCTCGGTGGTCCGAGATCTCACCGATC
GGCTGGAGAGCATGCGTACCTGCTACGACCTGATCACCAAGCATGGCGCA
GCCTTGCAGCGCGCTCTCAACGATCTGGAGACGAACGAGGAGGAGTCGCT
GGGCAGCCGCACGAAGATCGTTCACGAGAGGGCGACCCTCTTCCGGATAA
CCTCCATGCGATGATCAACGCCGGCAACAACTTACCTGCACA
MXO04128.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:12:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6708-PA | 2355 | Osbp-RA | 270..580 | 296..606 | 1505 | 99.3 | Plus |
CG6708-PA | 2355 | Osbp-RA | 21..269 | 46..294 | 1245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osbp-RA | 3248 | CG6708-RA | 373..979 | 35..642 | 2895 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24937253..24937850 | 632..35 | 2820 | 98.8 | Minus |
Blast to na_te.dros performed 2014-11-28 19:03:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsub\bilbo | 5540 | Dsub\bilbo 5540bp Derived from U73803 (Rel. 54, Last updated, Version 1). | 1262..1306 | 237..193 | 108 | 71.1 | Minus |
MXO04128.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:12:58 Download gff for
MXO04128.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6708-PA | 1..615 | 26..641 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:35 Download gff for
MXO04128.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osbp-RA | 364..978 | 26..641 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:02 Download gff for
MXO04128.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Osbp-RA | 364..978 | 26..641 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:02 Download gff for
MXO04128.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24937245..24937859 | 26..641 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:35 Download gff for
MXO04128.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20762967..20763581 | 26..641 | 98 | | Minus |