MXO04131.5prime Sequence
868 bp (763 high quality bases) assembled on 2007-07-18
> MXO04131.5prime
CCCTTTAGGAGGTTATCANNNCGAATGNATCTGAACCACCTGCCTCGGAC
GCAATGGAAGTACCTACAATACCTTCTGCGAGTGCGTCAGCTTCAGCTCC
TGCGACGGCACGTTAACATTGGCGCAAAGCCGCCCATCCAAACAGCTGCC
TTGCTGCCGGCATTGGGCCAAAAACTGAGGAAGCACTCGCAGCTGGTGAA
CGGAGATCTCCAAGACAAGTTTGGCGTGCCACGGGAACAGGATGCTCTTC
TAACCCGACTGGAGGAGGCCAAGACGGGTAACCAGATTTTAGATGTGTTG
GAGAGCTGTGACGGCCTGCAGAGCTCCCATGTGGTGATGGGAATCTCACT
GCTGTGGAACATCTATCACGACGCGGAGCAGGCAAGTAAAGATGCCATCA
CGGATCGCGTGCTGCTTAACGTGCTCCCAAAGTTGGCCCCTTATGTACAC
CAACTGGAGATCGATGATCTCAGTAGATGCTACCTGTACCTGCGCAAAAT
GCATATACCAAACTCCGAGGCAGTCGTGGAGGCCGTGCTGACGAGATCTC
TTCAATTAATCGAGTCACAAGTTGATGACGAAGTCATTCCCTTGACCTCC
TTGTCTCGCCTCTCGGTGGGCATCAACTTGGAACGCGACTTCTTCACTCC
GCTTGTGTGTAGGAACTTTATTCCGCACCTGGAACATCACATCAATTGGT
GTCGCAGCGCAGAGCAGGTTCGCCTTCTGTCCACGTGCCTCTTTCAGCTA
CACTTTCTCATTGATGAGGAGCTGTTTACGCGCTTCAAGTTGCGCTTGAC
TGAAATGATGCAAAGCGGCGTCCTCAGCAGCGAAACCCCTAAGGCTCTTC
TGAAGGTGATCCACATGC
MXO04131.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:13:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31643-PA | 2700 | CG31643-RA | 1..844 | 25..868 | 4151 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:49:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31643-RB | 2842 | CG31643-RB | 87..930 | 25..868 | 4179 | 99.6 | Plus |
| CG31643-RA | 2938 | CG31643-RA | 87..930 | 25..868 | 4179 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:49:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6038203..6039046 | 25..868 | 4179 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:49:53 has no hits.
MXO04131.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:13:11 Download gff for
MXO04131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31643-PA | 1..844 | 25..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:48 Download gff for
MXO04131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31643-RA | 43..886 | 25..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:17 Download gff for
MXO04131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31643-RA | 87..930 | 25..868 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:17 Download gff for
MXO04131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6038203..6039046 | 25..868 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:48 Download gff for
MXO04131.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6038203..6039046 | 25..868 | 99 | | Plus |
