MXO04141.5prime Sequence
813 bp (745 high quality bases) assembled on 2007-07-18
> MXO04141.5prime
CCCTTTAGGGGCGTTATCAGTCGACATGCGGCGCAGGCTGGCCCCTTGCC
GACGTGGACCACTGCGTCCCGAGTCCCGTCACTCCTTCACGCCGCCACTG
CTGAAGAAAAACAAGCGATCCTGCCAGCAGGAACTGGAGCGAGAGCAAGA
ACTGGACAGAAGACGACTGGGCGCCCTCCGAGATGCCAGCAACACATCAG
AGCTCCCACTGCCTATTCGCTTCACGGCGAACAGCGAGTATGAGTTGGCC
ATTGCCAAGGTTCTGGCACGGAAGTTCAAGGTGCCCATGGACAATTACGT
ACCGGATTACGGTGGTAAACGGGTCCTGGGCGTGCGGCGCTGCATTTCCC
GACGACCCCTACACGATCCGATGGCCTGCAACGCCTTGGTACTCTTCCAT
CCACCCGCCTACACAGAACACGAGCGCATGGGCATGGATCCGACCAAGGT
TCTGGTGCACGTCGTCGTCGATCCGCTGCTGAGCAACATATTGCGGCCGC
ACCAGCGCGAGGGAGTGCGTTTCATGTACGAGTGTGTGGAGGGAAAGCGG
GGCAACTTCAATGGATGCATCATGGCCGACGAAATGGGTCTCGGGAAGAC
GCTGCAGTGCGTAACGCTGGTCTGGACACTTCTAAGGCAGGGGCCCGAGT
GCAAGCCGACGATCAACAAAGCCATTGTCGTGTCTCCATCATCGCTGGTT
AAGAACTGGGAGAAGGAGTTTACCAAGTGGCTTCACGGTCGACTCCTTTG
CCTGCCCATGGAGGGCGGGACCAAAGAGAACACCTTCCGAACACTCGAGC
AGTTCTCCATGAC
MXO04141.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:13:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3736-PA | 2355 | okr-RA | 27..788 | 52..813 | 3735 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| okr-RA | 2878 | CG3736-RA | 51..838 | 26..813 | 3820 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2991865..2992650 | 813..28 | 3810 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:19:43 has no hits.
MXO04141.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:13:40 Download gff for
MXO04141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3736-PA | 1..788 | 26..813 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:12 Download gff for
MXO04141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| okr-RA | 51..838 | 26..813 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:20 Download gff for
MXO04141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| okr-RA | 51..838 | 26..813 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:20 Download gff for
MXO04141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2991865..2992650 | 28..813 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:12 Download gff for
MXO04141.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2991865..2992650 | 28..813 | 98 | | Minus |
