MXO04152.5prime Sequence
757 bp (715 high quality bases) assembled on 2007-07-18
> MXO04152.5prime
CTCTTAAGGAAGNNATCNNNNNAANGGAAANGGGAAGGGACCTGGATCGG
GAGNANCGCAGCGGGGGCNGGAGCGNCGGNGGAGCAGCTGGNAGCCCAGA
CACGGCAGGCGGCCACAAANCCGAGCCANGAGANTGGCCAGAAGGCGGAG
GCGCAGCTGCGCGAGGGGGAGCAGCAGCCGGGCTTCNTTCCCACGATTGC
CCGTCTGAGCATGCGACGAGGTGGCGGCGGCGACGTGGTGTCCAGTACGG
AGGACTCCGAGGTGAAGGTGCGCTGGATGGCGGCTGTCTACCTAAAGAAT
GGCGTGGAGCGCTATTGGCGGCCCAATTCGCGGCAGGAACTGCCCGCGGA
GCAAAAGCAGCAGATCCGGGAAGTACTTCTGCGTCACTACGACGCAGAGG
AAGTGCCCCAGGTAGCCCTGCAGGTAGCCGTGCTCCTGGGTCGCCTGGCA
CGCACGGATTACCCGCGATTTTGGCCGGATCTGCTGCCGACACTCATGAA
GCAGCTGCAGTCCTGCGGTACGGATGGGGATTCGGCCCTGCAGCAGCGAA
TTCTTATTGTCCTACACTATGTCCTCAAGGCCCTGGCCTCACGGCGTCTG
ATGGCCGAGCAGCGTGCCTTCCAGGAGCTGGGCTTACAGATATTTGGATA
TCTGGCGTGGGACATTTGGGCACCACTTACGACGCGCTTTTTTGCAGCTC
GTGCGAAAGGACGAGGCCATGGCCCCTCATGCCCTTCAACGGGCGTATGT
GGTGATG
MXO04152.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:14:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33139-PA | 3228 | Ranbp11-RA | 36..671 | 57..692 | 2928 | 98.1 | Plus |
| CG33139-PA | 3228 | Ranbp11-RA | 667..703 | 689..725 | 185 | 100 | Plus |
| CG33139-PA | 3228 | Ranbp11-RA | 707..735 | 729..757 | 145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ranbp11-RA | 3395 | CG33139-RA | 122..821 | 57..757 | 3287 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15682840..15683539 | 57..757 | 3262 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:43:56 has no hits.
MXO04152.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 13:14:12 Download gff for
MXO04152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33139-PA | 36..735 | 57..757 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:16 Download gff for
MXO04152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ranbp11-RA | 122..821 | 57..757 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:15 Download gff for
MXO04152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ranbp11-RA | 122..821 | 57..757 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:15 Download gff for
MXO04152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15682840..15683539 | 57..757 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:16 Download gff for
MXO04152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11570345..11571044 | 57..757 | 97 | | Plus |
