MXO52509.5prime Sequence
681 bp (681 high quality bases) assembled on 2007-04-11
> MXO52509.5prime
CAGTCGACATGGACTTCGGAGACGACTTCGCTGCCAAGGAGGACGTGGAT
CCGGCGGCCGAGTTCCTGGCGCGCGAACAGTCAGCTCTCGGGGACTTGGA
GGCGGAGATTACGGGTGGATCTGCATCAGCTCCTCCGGCTGCATCCACAG
ACGAGGGCTTGGGTGAGCTTCTGGGAGGCACCGCCTCCGAAGGCGATTTG
CTCTCTGCTGGCGGCACGGGTGGCCTCGAATCCTCCACTGGCAGTTTTGA
GGTCATTGGTGGCGAGTCCAATGAACCCGTGGGCATATCCGGTCCGCCGC
CGTCGCGGGAAGAGCCCGAAAAGATACGCAAATGGCGCGAAGAGCAAAAG
CAACGACTGGAGGAGAAGGACATCGAGGAGGAGCGAACAAAGGAGGAACT
CCGACAGCAGTCCAAGAAGGAGCTGGACGACTGGTTGCGCCAGATTGGCG
AGTCCATATCGAAGACCAAACTGGCGTCGCGGAATGCCGAGAAACAAGCC
GCCACCCTGGAGAATGGCACCATCGAGCCGGGCACCGAATGGGAGCGCAT
AGCCAAGCTCTGCGACTTCAATCCCAAGGTGAACAAGGCGGGAAAGGACG
TCTCCCGCATGCGATCCATCTACCTGCACCTCAAGCAGAATCCCATCCAG
GTGCAGAAGAGCACCGCAAGCTTTCTAGACC
MXO52509.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:41:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6948-PA | 660 | Clc-RA | 1..657 | 9..665 | 3210 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Clc-RD | 1073 | CG6948-RD | 135..792 | 8..665 | 3245 | 99.5 | Plus |
| Clc-RC | 1230 | CG6948-RC | 292..949 | 8..665 | 3245 | 99.5 | Plus |
| Clc-RB | 1005 | CG6948-RB | 67..724 | 8..665 | 3245 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20242797..20243454 | 8..665 | 3245 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:47:17 has no hits.
MXO52509.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:52 Download gff for
MXO52509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6948-PA | 1..660 | 9..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:38 Download gff for
MXO52509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clc-RB | 61..724 | 1..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:14 Download gff for
MXO52509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Clc-RB | 61..724 | 1..665 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:14 Download gff for
MXO52509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20242791..20243454 | 1..665 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:38 Download gff for
MXO52509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20235891..20236554 | 1..665 | 99 | | Plus |
