MXO52510.5prime Sequence
633 bp (633 high quality bases) assembled on 2007-04-11
> MXO52510.5prime
CAGTCGACATGAGTTCTCTAAAGCTCCAGAAGAGGCTCGCAGCCTCCGTG
CTGCGATGCGGCAAGAAGAAGGTCTGGTTGGATCCCAATGAAATCAACGA
GATCGCTAACACAAACTCGCGTCAGAACATTCGCAAGCTTATCAAGGATG
GTCTGATCATCAAGAAGCCCGTCGTGGTCCACTCCCGTTACCGTGTGCGC
AAAAACACCGAGGCCCGCCGCAAGGGACGTCACTGCGGATTCGGAAAGCG
TAAGGGTACTGCGAACGCCCGCATGCCTACCAAGCTGCTGTGGATGCAGC
GCCAGCGCGTTCTGCGCCGCCTGTTGAAGAAGTACCGCGACAGCAAGAAG
ATTGACAGGCACCTGTACCACGACCTGTACTTGAAGTGCAAGGGTAACGT
ATTCAAGAACAAGCGCGTCCTCATGGAGTACATCCACAAGAAGAAGGCTG
AGAAGCAGCGCAGCAAGATGCTGGCTGATCAGGCCGAGGCTCGCCGACAG
AAGGTGCGTGAGGCCCGCAAGCGCCGCGAGGAGCGTATTGCCACCAAGAA
GCAGGAGCTCATCGCCCTGCATGCTAAGGAGGACGAGATCGCTGCCAAGG
CCGCCACCGCGGGTCACGCAAGCTTTCTAGACC
MXO52510.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:41:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2746-PA | 612 | RpL19-RA | 1..609 | 9..617 | 3020 | 99.8 | Plus |
| CG2746-PB | 612 | RpL19-RB | 1..609 | 9..617 | 3020 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL19-RB | 755 | CG2746-RB | 36..645 | 8..617 | 3035 | 99.8 | Plus |
| RpL19-RA | 1361 | CG2746-RA | 74..683 | 8..617 | 3035 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24968555..24969051 | 617..121 | 2470 | 99.8 | Minus |
| 2R | 25286936 | 2R | 24969116..24969226 | 122..12 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:47:20 has no hits.
MXO52510.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:52 Download gff for
MXO52510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2746-PB | 1..612 | 9..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:40 Download gff for
MXO52510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL19-RA | 68..692 | 1..627 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:16 Download gff for
MXO52510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL19-RA | 68..692 | 1..627 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:16 Download gff for
MXO52510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24968546..24969051 | 121..627 | 99 | <- | Minus |
| 2R | 24969118..24969226 | 12..120 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:40 Download gff for
MXO52510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20856069..20856574 | 121..627 | 99 | <- | Minus |
| arm_2R | 20856641..20856749 | 12..120 | 100 | | Minus |
