MXO52513.5prime Sequence
390 bp (390 high quality bases) assembled on 2007-04-11
> MXO52513.5prime
CAGTCGACATGGAACAAAATGCGAACCCTAAACGCTCCTTTAAGCGTCCG
TTTACCTTTCCAAAGAACTGTGTTTACCGCCCTCTACGTCAGATAAGCAA
CATGGAGCGTAGCCAGAAGCTGTCCGCCGAACAACCCACCTACTTCACGC
TCAATGCACCGCCCTCGTTGGTTCCGGCCAAGAAGTACTCGGATATCAGC
GGTCTGCCCGCTCCTTATGCCGATCCGCACACGAAACTAAGGTTCGCCAG
CGCCGACGAGTACGCGTCCATGCAGCACATGCCCTCGGACATCGTCAATG
GCTACCTCATGGTGCGCGGCTATACCTGCGCCGTGGGAGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCTTTTTTTTGCCCCCC
MXO52513.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:41:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12659-PB | 333 | CG12659-RB | 1..330 | 9..338 | 1600 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12659-RC | 896 | CG12659-RC | 36..365 | 9..338 | 1620 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8591306..8591502 | 338..142 | 970 | 99.5 | Minus |
| X | 23542271 | X | 8591562..8591694 | 141..9 | 650 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:51:38 has no hits.
MXO52513.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:53 Download gff for
MXO52513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12659-PB | 1..333 | 9..339 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:41 Download gff for
MXO52513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12659-RC | 36..371 | 9..347 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:13 Download gff for
MXO52513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12659-RC | 36..371 | 9..347 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:13 Download gff for
MXO52513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8591300..8591502 | 142..347 | 97 | <- | Minus |
| X | 8591562..8591694 | 9..141 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:41 Download gff for
MXO52513.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8485333..8485535 | 142..347 | 97 | <- | Minus |
| arm_X | 8485595..8485727 | 9..141 | 99 | | Minus |
