MXO52518.5prime Sequence
501 bp (501 high quality bases) assembled on 2007-04-11
> MXO52518.5prime
CAGTCGACATGTCCGGCATTGCTATTACACGATTGGGGGAGGAGCGCAAG
GCCTGGCGCAAGGATCACCCATTCGGGTTCGTCGCACGACCCGCCAAGAA
CCCTGACGGCACCCTCAACCTGATGATCTGGGAGTGCGCCATTCCCGGCA
AGAAGTCCACCCCCTGGGAGGGCGGGCTCTACAAGCTGCGCATGATCTTC
AAGGACGACTACCCCACCTCGCCGCCCAAGTGCAAGTTCGAACCGCCGCT
GTTCCACCCGAACGTCTATCCCTCGGGCACCGTTTGCCTGTCGCTGCTGG
ACGAGGAGAAGGACTGGCGCCCCGCCATCACCATCAAGCAAATCCTGCTG
GGCATCCAGGACCTGCTCAACGAGCCGAACATCAAGGACCCGGCCCAGGC
GGAGGCCTACACCATCTACTGCCAGAACCGACTGGAGTACGAGAAGCGCG
TGCGTGCCCAGGCCCGCGCCATGGCGGCCACCGAGGCAAGCTTTCTAGAC
C
MXO52518.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:42:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3018-PA | 480 | lwr-RA | 1..473 | 9..481 | 2315 | 99.5 | Plus |
| CG3018-PB | 480 | lwr-RB | 1..473 | 9..481 | 2315 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lwr-RD | 1105 | CG3018-RD | 250..727 | 8..485 | 2345 | 99.4 | Plus |
| lwr-RC | 1363 | CG3018-RC | 254..731 | 8..485 | 2345 | 99.4 | Plus |
| lwr-RB | 1294 | CG3018-RB | 283..760 | 8..485 | 2345 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 541771..542248 | 485..8 | 2345 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:25:33 has no hits.
MXO52518.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:55 Download gff for
MXO52518.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3018-PB | 1..480 | 9..486 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:31 Download gff for
MXO52518.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lwr-RB | 276..760 | 1..485 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:10 Download gff for
MXO52518.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lwr-RB | 276..760 | 1..485 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:10 Download gff for
MXO52518.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 541771..542255 | 1..485 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:31 Download gff for
MXO52518.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 541771..542255 | 1..485 | 98 | | Minus |
