MXO52525.5prime Sequence
640 bp (638 high quality bases) assembled on 2007-04-11
> MXO52525.5prime
CAGTCGACATGGATAACATAGTCTACGACTTTGCCAAGATCACGTTTCAA
GCAAAAGACAACAGGTCACCCACTACTAACTCGAATCTGTCGTGGCAACT
AAATCAGATGGCCTTGTCGGACATGGAGGAGATGCAGGACACATCCGAGC
CCATAGCTCCACCCGAATCCGATGACAATGTCAGCAGTGAATCGCATGAC
TCCGACGATGTAGACTCGCAATTGAGTCGCTGCGAGGACAACGATGACGA
CAGCGATTGCATCAGTGGATCCTCCAGACGCAGTTCCACTTTTGGAGCTC
GAGCGGGCGTGGCTCGTCGCAGAATGCCCGCCAGGGTGTCCAAGGACAAC
TTTAACCGGATCTGCAGCGCCATCATGATACCCATCAAAAAGAAGCAACG
CAAAGAACTGAACACAAATGCCCAAACACTTAAAAGCATCGAAAAGATCT
ACACCAGCAGGCGCATGAAAAAGTTCACGCCCACCAATCTGGAGACAATC
TTCGAGGAACCCAGCGATGAGAATGCCGCCGATGCAGAGGACGACAGCGA
AGAGTGCTCCATCAGCAGCCAAGTGAAAGTAGTTAAGGTGTGGGGTCGCA
AACTCCGCCGGGCAATATCCTTCAGCGATGGCCTGAACAA
MXO52525.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:43:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6586-PA | 900 | tan-RA | 1..632 | 9..640 | 3135 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tan-RB | 1657 | CG6586-RB | 316..947 | 9..640 | 3145 | 99.8 | Plus |
| tan-RA | 1494 | CG6586-RA | 316..947 | 9..640 | 3145 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6055714..6056292 | 62..640 | 2880 | 99.8 | Plus |
| 3L | 28110227 | 3L | 6055608..6055665 | 9..66 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:29:51 has no hits.
MXO52525.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:58 Download gff for
MXO52525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6586-PA | 1..630 | 9..638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:45 Download gff for
MXO52525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tan-RA | 316..945 | 9..638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:39 Download gff for
MXO52525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tan-RA | 316..945 | 9..638 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:39 Download gff for
MXO52525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6055608..6055663 | 9..64 | 100 | -> | Plus |
| 3L | 6055717..6056290 | 65..638 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:45 Download gff for
MXO52525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6048708..6048763 | 9..64 | 100 | -> | Plus |
| arm_3L | 6048817..6049390 | 65..638 | 99 | | Plus |
