MXO52558.5prime Sequence
622 bp (560 high quality bases) assembled on 2007-04-11
> MXO52558.5prime
CAGTCGACATGAGCGAGTCGAATGCCACAGATGGTGTCCACGAGGTTGAG
GAGTCCAATCCGCTGGAGCAGTCGACCATTACGATGCTAGATGTCCTGGA
ACAGGAAAAGGAGCTGGAGGACGAGTACGCCGCAGTGCTGGGCGCCTCCG
ATGAGAAGTCGTGCACTTACGCCAAGGGCCCCATCGGCCGACAGGCTCTG
TACTCGTGCCTCACTTGTTGCCCCGAGGCGCGCGAGGATCTGGACAAGGC
CGCAGGAGTCTGCTTGGCCTGCTCCTATCGCTGTCACGAGCACCACGAAC
TGGTGGAGCTCTATACTAAGCGGAATTTCCGCTGCGATTGTCCCACCCAG
CGTCTGGGCAAGTGCTCCCTGAACCCACAAGTCGAGGGCGTTCAACCACG
TAACGTGGGCAATCTGTATAACCAGAACTTCCAGGGGCTGTACTGCAAGT
GCAAGCGACCCTATCCCGATCCCGATCGCACCGTTGAGGAGGTTATGCTG
CAGTGCGCCATCTGCGAGGACTGGTTCCACTTGCCGCACATGAAAGCGCC
CGGCGCCAGCGACAAGTGGCTGGATGTCTGCAGCGAAATGATTTGCGATG
GCTGCATGGATGCCAAACCCTT
MXO52558.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15141-PA | 1215 | CG15141-RA | 1..614 | 9..622 | 3070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15141-RA | 1683 | CG15141-RA | 138..754 | 6..622 | 3085 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17410778..17411394 | 6..622 | 3085 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:37:22 has no hits.
MXO52558.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:09 Download gff for
MXO52558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15141-PA | 1..614 | 9..622 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:19 Download gff for
MXO52558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15141-RA | 133..754 | 1..622 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:06 Download gff for
MXO52558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15141-RA | 133..754 | 1..622 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:06 Download gff for
MXO52558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17410773..17411394 | 1..622 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:19 Download gff for
MXO52558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17410773..17411394 | 1..622 | 99 | | Plus |
