MXO52559.5prime Sequence
806 bp (769 high quality bases) assembled on 2007-04-11
> MXO52559.5prime
CAGTCGACATGCAGCGAGTCCAGGCCGACCAAAAGCCAGCCAGAATGCAC
CAGCATGCACATACGCATTCGCACGCGCACAGTTTGCAGCATGCGGAGGA
GAAGGAGCACAATAGCAATGAGATGACGACCAACTTGTCGTCGACTGGCC
GAATTGCGGCCAGTAGCAGTGCCACGCCCAGCGCAGCAGCGGGAGGCGGG
GCCAGCGGAGCACCCACTCCGCCCAAGAGTCTGGCGCTCAATCAGAACCA
TCACTATGCACCCGGTTCGGATACATCCGGGGAACAGGAGGAGGAGCTGC
TGGACTCGCGATACGAGTGCGCCATTTGCATCGATTGGCTAAATGAGCCG
GTGTTGACGTCGTGCGGCCATCGATTTTGTCGCAGCTGCCTCACCGCCTG
GATGCAAAAGAACAATCAATGCTGCCCCATGGACAACAAGCGTCTGTCCG
CCGAGCACGACATCTTTCCGGACAACTACACGCGCCGCGAGATCGAGCAA
CTCAAGCGAGATTGCCCCAACTCCTCGCTGGGCTGTTCGGTGGTTGCCTC
GCCCATCGAACTGCATCGCCATCTGCCCAGTTGTCCCTATCGGCGGCAGC
AGGAGCCGCAGGAGGAGAAGTGCCCGTTTGCCAAGATCAAGTGCGATTTT
GTGGGCCGACCAGAGACCAATCAGTTGGAGGAGCACCTCAAGGCCGACAT
GCCGCATCACATGCAGCTGATGCTGCAGGCATTCCAGCAGACAGCCATTG
CCACCTGGCAGCCACACAAGCCCAGCACAAGTGGCGCCGCCGTGGAGAAT
GGTCAT
MXO52559.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10961-PA | 1428 | Traf2-RA | 1..798 | 9..806 | 3990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Traf6-RA | 2788 | CG10961-RA | 126..923 | 9..806 | 3990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8156464..8157261 | 806..9 | 3990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:00:29 has no hits.
MXO52559.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:10 Download gff for
MXO52559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10961-PA | 1..798 | 9..806 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:03 Download gff for
MXO52559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Traf6-RA | 118..923 | 1..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:47 Download gff for
MXO52559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Traf6-RA | 118..923 | 1..806 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:47 Download gff for
MXO52559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8156464..8157269 | 1..806 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:03 Download gff for
MXO52559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8050497..8051302 | 1..806 | 99 | | Minus |
