MXO52564.5prime Sequence
811 bp (755 high quality bases) assembled on 2007-04-11
> MXO52564.5prime
CAGTCGACATGACGCGCGATGAGAAACTGCCACTTAAACAGGCGGAGGTC
TCCATCCAAAGGTTTCAGGATGTGGCGGTGCCCCACCATCTGAGCCTACT
GAAAAACCATCGCAGCAATATAGAAAAAAGCCTGGCGCTCGGCGACTGGC
AAAAAATCAAAAAGGAGGAACTCAATGCTATGAGGGTCATTAAGCAGATC
AAGAATCTACTTCTGGAAATGGATGCACTGCGAGAAAAAGTACGGGAGGA
GGATCTGGAACGTTTCGACGACCTAATGAAACCTGGCAGGGATACTGCCT
TCGCTGGCATGAAGGAATTTGCGGAGCTCCAACTCAAATCACCCACCTCC
ACTTTGAGTTCTCAGTACGACGACGATCTGGACAATCAGCCACAGGAGGT
GGATATGAACAGTCTACCCGCACACCGCCACATGCCCCAGCTGCAACTCA
ATTTCCAGCTGGAGGAACACCAATTGGCGCAGAGGCAAGCCTGCCTGGAT
CAGATGGAGAACCTGCAACAGGAGATCTACGATCTGCACGGGATGTTCCA
GGGAATGCGTCAACTGACTGCAGAGCAATCAGTGGCGGTGGAAAAGATAG
CAGACAATGCGGAGGAAGCTCTGGAGAATGTCCAGCAGGGCGAATTGAAT
CTGCGCCGGGCGCTCACCTACAAGAAGGCCATGTACCCCGTAGTCGGAGC
TCTTCTGGGCACCTGTGTGGGAGGACCCATTGGTCTGGTGGCGGGCATGA
AAGCTGGAGGATTGGCGGCAGTAGGATGTGGCATCCTCGGCTTCACCGGT
GGCTCTGTGCT
MXO52564.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7452-PA | 906 | Syx17-RA | 1..803 | 9..811 | 4015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx17-RB | 1566 | CG7452-RB | 341..1143 | 9..811 | 4015 | 100 | Plus |
| Syx17-RA | 1566 | CG7452-RA | 341..1143 | 9..811 | 4015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4404258..4404745 | 324..811 | 2440 | 100 | Plus |
| 3L | 28110227 | 3L | 4403950..4404197 | 77..324 | 1240 | 100 | Plus |
| 3L | 28110227 | 3L | 4403827..4403897 | 9..79 | 355 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:30:38 has no hits.
MXO52564.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:11 Download gff for
MXO52564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7452-PA | 1..803 | 9..811 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:29 Download gff for
MXO52564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx17-RA | 332..1143 | 1..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:12 Download gff for
MXO52564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx17-RA | 332..1143 | 1..811 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:12 Download gff for
MXO52564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4403818..4403895 | 1..77 | 96 | -> | Plus |
| 3L | 4403951..4404197 | 78..324 | 100 | -> | Plus |
| 3L | 4404259..4404745 | 325..811 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:29 Download gff for
MXO52564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4403818..4403895 | 1..77 | 96 | -> | Plus |
| arm_3L | 4403951..4404197 | 78..324 | 100 | -> | Plus |
| arm_3L | 4404259..4404745 | 325..811 | 100 | | Plus |
