MXO52565.5prime Sequence
648 bp (292 high quality bases) assembled on 2007-04-11
> MXO52565.5prime
CAATCGACATGTCTTCCGGAGATTTTGGCGATCCGCTGCGGAAGTTCAAG
CTCGTCTTCCTCGGCGAGCAGAGTGTGGGCAAGACCTCGCTGATTACGCG
CTTCATGTACGACAGCTTCGACGACACGTACCACGCGACGATCGGAATTG
ATTTCCTATCGAAGACCATGTACCTGGAGGATCGCACTGTGCGCCTGCAG
CTGTGGGATACGGCGGGACAGGAGCGATTCCGCTCGCTGATACCCTCGTA
CATACGCGACTCCACGGTGGCAGTGGTCGTTTACGATATCACCAACACCA
ACTCGTTCCACCAGACCTCCAAGTGGATCGATGACGTGCGCACGGAGCGG
GGTAGCGACGTCATCATCATGCTGGTGGGCAACAAGACGGATCTCTCCGA
CAAGCGTCAGGTGTCCACCGAGGAGGGTGAGCGCAAGGCGAAGGATCTTA
TCGTGATGTTCATCGAGACAAGCGCCAAGGCCGGCTACAATGTGAAGCAG
TTGTTCCGACGGGTGGCCGCGGCACTGCCCGGCATGGATTCCACGGAGAA
CAAGCCCTCCGAGGACATGCAGGAGGTTGTGCTAAAGGACTCACCCAACG
AGACTAAGGATCCCGAGGGCGGCTGCGCCTGCGCAAGCTTTCTAGACC
MXO52565.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:47:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6601-PA | 627 | Rab6-RA | 1..624 | 9..632 | 2920 | 98.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rab6-RB | 1896 | CG6601-RB | 318..941 | 9..632 | 3000 | 98.7 | Plus |
| Rab6-RA | 1830 | CG6601-RA | 318..941 | 9..632 | 3000 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12108176..12108799 | 632..9 | 3000 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:09:34 has no hits.
MXO52565.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:12 Download gff for
MXO52565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6601-PA | 1..627 | 9..633 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:03 Download gff for
MXO52565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab6-RA | 315..941 | 2..632 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:09 Download gff for
MXO52565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab6-RA | 315..941 | 2..632 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:09 Download gff for
MXO52565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12108176..12108802 | 2..632 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:03 Download gff for
MXO52565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12108176..12108802 | 2..632 | 98 | | Minus |
