MXO52566.5prime Sequence
246 bp (21 high quality bases) assembled on 2007-04-11
> MXO52566.5prime
CAATCCACATGGCCGCAAACTACTGCATCTCGACGGCACCTCTGCGTAGC
CAGCTGATGGACCTGATCTACTTCACTGGCACGCACAAGGACCAGGCGGA
CTTTTACCGCCAGCTGCTGAATACTGTGCTGACCAACACCGGCCAACAGC
TGATCGATGGCCTCCGGCTCTTTGTGGAGGCCATTGTAAACTATCACGTC
AGCCTGGTGATCTCGCGGCAGATCCTTAACAACGTGGGCAGCGAGC
MXO52566.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8725-PA | 1224 | CSN4-RA | 97..238 | 105..246 | 535 | 95 | Plus |
CG8725-PA | 1224 | CSN4-RA | 1..93 | 9..101 | 365 | 95.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CSN4-RB | 1466 | CG8725-RB | 42..279 | 9..246 | 980 | 94.1 | Plus |
CSN4-RA | 1703 | CG8725-RA | 279..516 | 9..246 | 980 | 94.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7972616..7972853 | 9..246 | 980 | 94.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:09:40 has no hits.
MXO52566.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:12 Download gff for
MXO52566.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8725-PA | 1..238 | 9..246 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:05 Download gff for
MXO52566.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CSN4-RA | 279..516 | 9..246 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:14 Download gff for
MXO52566.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CSN4-RA | 279..516 | 9..246 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:14 Download gff for
MXO52566.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7972616..7972853 | 9..246 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:05 Download gff for
MXO52566.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3860121..3860358 | 9..246 | 94 | | Plus |