MXO52571.5prime Sequence
130 bp (1 high quality bases) assembled on 2007-04-11
> MXO52571.5prime
CAATCGACTTGGGCTTATTCGGCAGACACTCCCAGTAGAGATCCCAAAGA
GCAGGTGCTGGAGTGGACGCATAAGATACGGAAAGAGGGCAACCCGCTGG
ATCTCCAGATCCGAAGGATCCCGCGCGAGG
MXO52571.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:48:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9779-PA | 672 | CG9779-RA | 2..121 | 10..130 | 415 | 94.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps24-RA | 1114 | CG9779-RA | 118..237 | 10..130 | 490 | 94.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4310579..4310656 | 130..53 | 315 | 93.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:09:52 has no hits.
MXO52571.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:14 Download gff for
MXO52571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9779-PA | 2..121 | 10..130 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:10 Download gff for
MXO52571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vps24-RA | 118..237 | 10..130 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:22 Download gff for
MXO52571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps24-RA | 118..237 | 10..130 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:22 Download gff for
MXO52571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4310579..4310654 | 55..130 | 93 | <- | Minus |
| 3R | 4310787..4310830 | 10..54 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:10 Download gff for
MXO52571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 136301..136376 | 55..130 | 93 | <- | Minus |
| arm_3R | 136509..136552 | 10..54 | 95 | | Minus |
