MXO52575.5prime Sequence
819 bp (771 high quality bases) assembled on 2007-04-11
> MXO52575.5prime
CAGTCGACATGAGCTCCTGGAAGGACAGTCTCACGAGCATTCCGGGCACG
GTGGCGCAGTTGATTAACGAGAGCGCCAGCAACCTGTTACACGCCTCATC
CACGCTGGGATCAACAGTTGGCCTTGGAGGCTCTGGCTCCACTGGATCTG
GATCCGAGGCCGGAGGCTCCGAGGAAAGTGGTCCACAAGGTGCGGAGTAC
AGGGCGTTGCCCATTCCCGCGTCCTTGGTGCGCGAGCAATGGCGCCTAAT
CTTCACCAGCGATGCCAATATCCAGGATTTGCAGGCGGCCATCGCCCATT
GCAGAGATCTCGTCCTGCTGAGCGAGGAACTCAGCGAGGAGCGTCGCTGG
TTGGTGCGGCACCTGGTAGATTTGCGATACTCACTGCAGGAGCTGGAGGA
GGCCCAGGAGCAGCATTCCCTATCGTCGGACATGGTAGTTATGAATGCCA
TACGTGCTGTGGTGGGTCATCATTTTGTGCCCCATCACCCGCATCATGGC
AAACGGAATCGTCTGCAGGCAGCCGCCAAGAGGAACTACTGTGACCACTG
CACCACCATTATTTGGAGTGTGGTGCAGAACTCGTACGTGTGCAGCGATT
GCGGATTCCTGGTCCATCAGAAGTGCATCGATGGCGTGAAGAGGGTTTGT
GCCCATGTCCTGGTTTCAGAGCGGCAGCATCCCATTTCGGAGATATGTCC
AGAAATCGGACTCGCCTCCCAGGGATACAAGTGCGCCGAGTGCGGGACGA
TGCTAAATATAAAAAAATACCTGGATTGAGCCGCGTCTATGCGACTATAG
TGGATTGTACTACTGCCCT
MXO52575.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:49:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11534-PA | 1479 | CG11534-RA | 1..810 | 9..819 | 4015 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11534-RA | 1637 | CG11534-RA | 78..887 | 9..819 | 4030 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12132223..12132976 | 9..762 | 3770 | 100 | Plus |
| 3L | 28110227 | 3L | 12133029..12133084 | 764..819 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:47:22 has no hits.
MXO52575.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:16 Download gff for
MXO52575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-PA | 1..810 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:11 Download gff for
MXO52575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-RA | 78..887 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:52 Download gff for
MXO52575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11534-RA | 78..887 | 9..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:52 Download gff for
MXO52575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12132223..12132976 | 9..763 | 99 | -> | Plus |
| 3L | 12133029..12133084 | 764..819 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:11 Download gff for
MXO52575.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12125323..12126076 | 9..763 | 99 | -> | Plus |
| arm_3L | 12126129..12126184 | 764..819 | 100 | | Plus |
