MXO52582.5prime Sequence
881 bp (797 high quality bases) assembled on 2007-04-11
> MXO52582.5prime
CAGTCGACATGTGGTCGCCGCGGGTTGCCCTACTTTTCCTGGCCCTAGCA
CTTAGCCAACCGGACGAGTTGGTGGAGGCCGCTGGTCCGCTGAAGGTGCT
GGGTCTTTTTCCCCATCCCGGAGTTAGCCACTTCCACTTCTTCCACCCCA
TCATGAAGGGTCTGGCCGAGGCGGGTCATGACGTGAGCGTGGTTTCCCAC
TTCCCGGACAAGCATCCGGTTGCCCACTACAAGGATTTCCCCCTCACCGG
AATGGACAAGCTCACGAACAGTGTTGATCTCAAGTTTTTCGAGAAGCGCA
CATTCTACAGTCACTTCCAGGAGTTCTTCCTGCTGTACGACTGGGGCAAA
CAGACATGCAACCTGACGCTCCGTTCGGAAGCACTGCAGCAGATCCTCAG
GCGTCCGGGACGCTTTGATGTGATCATCATGGAGCAATTCAACACTGACT
GCATGATGGGAGTGGCCCACCAGCTCCAGGCGCCGGTGATCGCCTTGAGC
AGCTGTGTGATGATGCCCTGGCACTACGAGCGAATGGGAGCTCCTTTGAT
ACCCTCTCACATCCCGGCGCTCTTCATGGCCCAGTCGCAGCACATGAACT
TTGGGGGACGACTGGCCAATTGGTTCAGCACCCACGCCTTAAATTGGATG
TACAAATTACTATCGGTTCCCGCTGCCGACGCCATGGTTCAGTACAAATT
CGGCCATGACGTGCCTTCGGTGGGCGAGCTGGTGAAGAACACATCCATGT
TCTTTGTGAACCAGCACTACTCGCTGTCTGGACCCAAGGTAACGCCGCCC
ATTGTCATCGAGCTGGGTGGCATCCACATCCAGAAATCGAAGCCTCTGCC
TGCCGATCTGCAGCGCATTCTGAACAATGCT
MXO52582.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17323-PA | 1560 | CG17323-RA | 1..873 | 9..881 | 4315 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17323-RD | 2212 | CG17323-RD | 140..1012 | 9..881 | 4335 | 99.8 | Plus |
CG17323-RC | 1988 | CG17323-RC | 79..951 | 9..881 | 4335 | 99.8 | Plus |
CG17323-RE | 2112 | CG17323-RE | 203..1075 | 9..881 | 4335 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18824795..18825167 | 283..655 | 1865 | 100 | Plus |
2L | 23513712 | 2L | 18824306..18824581 | 9..284 | 1380 | 100 | Plus |
2L | 23513712 | 2L | 18825234..18825459 | 656..881 | 1100 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:23:09 has no hits.
MXO52582.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:18 Download gff for
MXO52582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17323-PA | 1..873 | 9..881 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:41 Download gff for
MXO52582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17323-RE | 203..1075 | 9..881 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:58 Download gff for
MXO52582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17323-RE | 203..1075 | 9..881 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:58 Download gff for
MXO52582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18824306..18824581 | 9..284 | 100 | -> | Plus |
2L | 18824797..18825167 | 285..655 | 100 | -> | Plus |
2L | 18825234..18825459 | 656..881 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:41 Download gff for
MXO52582.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18825234..18825459 | 656..881 | 99 | | Plus |
arm_2L | 18824306..18824581 | 9..284 | 100 | -> | Plus |
arm_2L | 18824797..18825167 | 285..655 | 100 | -> | Plus |