Clone MXO52582 Report

Search the DGRC for MXO52582

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:525
Well:82
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG17323-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO52582.5prime Sequence

881 bp (797 high quality bases) assembled on 2007-04-11

> MXO52582.5prime
CAGTCGACATGTGGTCGCCGCGGGTTGCCCTACTTTTCCTGGCCCTAGCA
CTTAGCCAACCGGACGAGTTGGTGGAGGCCGCTGGTCCGCTGAAGGTGCT
GGGTCTTTTTCCCCATCCCGGAGTTAGCCACTTCCACTTCTTCCACCCCA
TCATGAAGGGTCTGGCCGAGGCGGGTCATGACGTGAGCGTGGTTTCCCAC
TTCCCGGACAAGCATCCGGTTGCCCACTACAAGGATTTCCCCCTCACCGG
AATGGACAAGCTCACGAACAGTGTTGATCTCAAGTTTTTCGAGAAGCGCA
CATTCTACAGTCACTTCCAGGAGTTCTTCCTGCTGTACGACTGGGGCAAA
CAGACATGCAACCTGACGCTCCGTTCGGAAGCACTGCAGCAGATCCTCAG
GCGTCCGGGACGCTTTGATGTGATCATCATGGAGCAATTCAACACTGACT
GCATGATGGGAGTGGCCCACCAGCTCCAGGCGCCGGTGATCGCCTTGAGC
AGCTGTGTGATGATGCCCTGGCACTACGAGCGAATGGGAGCTCCTTTGAT
ACCCTCTCACATCCCGGCGCTCTTCATGGCCCAGTCGCAGCACATGAACT
TTGGGGGACGACTGGCCAATTGGTTCAGCACCCACGCCTTAAATTGGATG
TACAAATTACTATCGGTTCCCGCTGCCGACGCCATGGTTCAGTACAAATT
CGGCCATGACGTGCCTTCGGTGGGCGAGCTGGTGAAGAACACATCCATGT
TCTTTGTGAACCAGCACTACTCGCTGTCTGGACCCAAGGTAACGCCGCCC
ATTGTCATCGAGCTGGGTGGCATCCACATCCAGAAATCGAAGCCTCTGCC
TGCCGATCTGCAGCGCATTCTGAACAATGCT

MXO52582.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG17323-PA 1560 CG17323-RA 1..873 9..881 4315 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG17323-RD 2212 CG17323-RD 140..1012 9..881 4335 99.8 Plus
CG17323-RC 1988 CG17323-RC 79..951 9..881 4335 99.8 Plus
CG17323-RE 2112 CG17323-RE 203..1075 9..881 4335 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18824795..18825167 283..655 1865 100 Plus
2L 23513712 2L 18824306..18824581 9..284 1380 100 Plus
2L 23513712 2L 18825234..18825459 656..881 1100 99.1 Plus
Blast to na_te.dros performed on 2014-11-28 22:23:09 has no hits.

MXO52582.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:18 Download gff for MXO52582.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17323-PA 1..873 9..881 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:41 Download gff for MXO52582.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17323-RE 203..1075 9..881 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:58 Download gff for MXO52582.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17323-RE 203..1075 9..881 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:58 Download gff for MXO52582.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18824306..18824581 9..284 100 -> Plus
2L 18824797..18825167 285..655 100 -> Plus
2L 18825234..18825459 656..881 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:41 Download gff for MXO52582.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18825234..18825459 656..881 99   Plus
arm_2L 18824306..18824581 9..284 100 -> Plus
arm_2L 18824797..18825167 285..655 100 -> Plus