MXO52590.5prime Sequence
621 bp (621 high quality bases) assembled on 2007-04-11
> MXO52590.5prime
CAGTCGACATGGTCAAACTATTCGCGTTGAGCATCTTTCACAAGGGCGCC
AGCGAGGCGCGTCTCCTGAAGACCGCCTCGGACCTGCAGTCCTTCTCCTT
TTTCCAACGTGGCACCGTCAACGAGTTCATGACTTTCGCTTCGAAGACGA
TTGTGGAGCGCACACAGCCGGCCCTGCGGCAATCGGTGAAACAGGATGCC
TACATGTGTCATGTCTATGTGCGGGCGGACAATCTGGCCGGTGTACTGAT
CGCCGATCATGAGTATCCGCATCGCGTGGCGCACACGCTTATCACAAAGA
TTCTGGATGACTTTACGGCCAAGGTGTCGGCCGATCAGTGGCCCAATGGC
ACGGAGGCCACTATCTCATTTGACTTGCTGCCACCGTTTCTAGCACGCTA
TCAAAATCCCGTCGAAGCAGATCCGCTGACGAAAATGCAAAACGACCTGG
ACGAAACGAAGATCATACTGAAGAATACCATCGAGGCGGTGCTGGAGCGG
GGCGAGAAGCTGGACGACATGGTCAGCAAGTCGGAGAAATTGTCGCTGCA
GAGCAAGGCGTTCTACAAGACGGCGAAAAAGACTAACTCCTGCTGCAGCT
TCACCGCAAGCTTTCTAGACC
MXO52590.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:51:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1515-PA | 600 | l(1)G0155-RA | 1..597 | 9..605 | 2960 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ykt6-RA | 1469 | CG1515-RA | 268..864 | 9..605 | 2970 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7920890..7921361 | 134..605 | 2345 | 99.8 | Plus |
| X | 23542271 | X | 7920676..7920800 | 9..133 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:36:14 has no hits.
MXO52590.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:20 Download gff for
MXO52590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1515-PA | 1..600 | 9..606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:50 Download gff for
MXO52590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ykt6-RA | 260..864 | 1..605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:55 Download gff for
MXO52590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ykt6-RA | 260..864 | 1..605 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:55 Download gff for
MXO52590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7920668..7920800 | 1..133 | 97 | -> | Plus |
| X | 7920890..7921361 | 134..605 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:50 Download gff for
MXO52590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7814701..7814833 | 1..133 | 97 | -> | Plus |
| arm_X | 7814923..7815394 | 134..605 | 99 | | Plus |
