MXO52591.5prime Sequence
789 bp (785 high quality bases) assembled on 2007-04-11
> MXO52591.5prime
CAGTCGACATGACGGAGCTGGGCATGGAGCTGGAGAGCGTTCGCCTGGCG
ACATTTGGGGAATGGCCCCTGAATGCCCCAGTTTCCGCGGAGGATCTGGT
CGCCAATGGTTTCTTTGCCACGGGAAACTGGCTGGAGGCCGAGTGCCATT
TCTGCCACGTGCGCATCGACCGCTGGGAATACGGCGATCAAGTGGCGGAG
CGCCATCGCCGCTCCTCGCCCATCTGCTCCATGGTTCTGGCTCCCAATCA
CTGCGGCAATGTTCCCAGGAGCCAGGAGAGCGACAACGAGGGAAACAGCG
TAGTGGACAGCCCGGAGTCCTGCTCTTGTCCCGATCTCTTGTTGGAGGCC
AATCGCTTGGTAACTTTCAAGGACTGGCCGAATCCCAACATCACGCCGCA
GGCTCTGGCAAAGGCAGGTTTCTACTACCTGAACCGTCTGGATCACGTGA
AGTGTGTTTGGTGCAACGGAGTGATTGCCAAGTGGGAGAAGAACGACAAT
GCCTTTGAAGAGCACAAGCGCTTTTTTCCCCAATGTCCTCGTGTGCAAAT
GGGCCCCCTTATAGAGTTTGCCACCGGGAAGAACCTGGATGAGCTGGGCA
TCCAGCCCACCACTCTGCCACTGCGTCCCAAGTACGCCTGCGTGGACGCC
AGATTGAGAACCTTCACCGATTGGCCCATTTCCAATATTCAGCCCGCTTC
GGCTTTGGCGCAGGCTGGCCTATATTATCAGAAAATAGGCGACCAGGTGC
GCTGTTTCCACTGCAACATTGGATTGCGCTCCTGGCAGA
MXO52591.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:51:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8293-PA | 1497 | Iap2-RA | 1..781 | 9..789 | 3905 | 100 | Plus |
| CG8293-PB | 1497 | Iap2-RB | 1..781 | 9..789 | 3905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap2-RB | 1997 | CG8293-RB | 39..819 | 9..789 | 3905 | 100 | Plus |
| Diap2-RA | 2106 | CG8293-RA | 148..928 | 9..789 | 3905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15933411..15933820 | 789..380 | 2050 | 100 | Minus |
| 2R | 25286936 | 2R | 15934199..15934570 | 380..9 | 1860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:23:22 has no hits.
MXO52591.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:21 Download gff for
MXO52591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8293-PB | 1..780 | 9..788 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:44 Download gff for
MXO52591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iap2-RA | 141..927 | 1..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:05 Download gff for
MXO52591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Diap2-RA | 141..927 | 1..788 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:05 Download gff for
MXO52591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15933412..15933819 | 381..788 | 100 | <- | Minus |
| 2R | 15934199..15934574 | 1..380 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:44 Download gff for
MXO52591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11820917..11821324 | 381..788 | 100 | <- | Minus |
| arm_2R | 11821704..11822079 | 1..380 | 98 | | Minus |
