MXO52594.5prime Sequence
377 bp (374 high quality bases) assembled on 2007-04-11
> MXO52594.5prime
CAGTCGACATGTTCGTCAACTCCATGCACGTTCCGCGGCAATCCGGCGAA
CTACCACCAGCAGCAGCCGGCCCTGAACCACCACACGCTGGCAGCGGCGC
ACCACCAGCAGCAGCTGCACCACCACGCCGCTGCAGCTGGTCACCTGAGC
CACGTCGGCGGTGGGCACGCAGCCAGTAACCACCTGGCGGCCGCCGCTGT
TCTCGGACGGCATGGCCACAACTCCCTGGGCAGCGGGCACACGTCCACGT
CCTCGCACTCGGCCAATGTGGGCGTGGGAGTCGGCGGGGGAGCTCTGGCT
AGCGGCTCCACTGGGGGCAGCGGAGGCAACAGCTCTCCGGACAGTGGCAA
GATCTATATCAAGAACCTGGAGCGGTC
MXO52594.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:52:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4612-PA | 924 | CG4612-RA | 1..368 | 9..377 | 1805 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4612-RC | 3922 | CG4612-RC | 555..922 | 9..377 | 1820 | 99.7 | Plus |
| CG4612-RA | 2091 | CG4612-RA | 555..922 | 9..377 | 1820 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24525105..24525472 | 377..9 | 1795 | 99.7 | Minus |
Blast to na_te.dros performed 2014-11-28 22:23:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 2067..2131 | 208..274 | 114 | 65.7 | Plus |
| aurora-element | 4263 | aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). | 1184..1248 | 208..274 | 114 | 65.7 | Plus |
MXO52594.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:22 Download gff for
MXO52594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4612-PA | 1..368 | 9..377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:46 Download gff for
MXO52594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4612-RA | 547..922 | 1..377 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:08 Download gff for
MXO52594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4612-RA | 547..922 | 1..377 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:08 Download gff for
MXO52594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24525105..24525480 | 1..377 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:46 Download gff for
MXO52594.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20412628..20413003 | 1..377 | 98 | | Minus |
