MXO52604.5prime Sequence
667 bp (606 high quality bases) assembled on 2007-04-02
> MXO52604.5prime
CAGTCGACATGGCCGATGTGGACGATTTTGATTCTCTGTCCAATGCTGAG
TTGCGCGCCAAGATGCTGGCACAGGGGCTGCCCAACATCCCCGTGACGGA
TAGCAGCCGGAAGGTTCTAGTAAAGCGTCTGCGCGCCTCCATTGGTGGCC
AGGCGTCGCCGGCCGCTAGTCCCAAGAAGACCAACAGGCGGGAGACCCTG
GCTCCCGCACCTGGTGCACCATCTGCTCCGGCGGCAGCCTCCACGCCGGT
GGACAAGCTGGATGGCAACAAGGTGGCGCCCGCCACAAAGGCTCGGCGCA
CAATTACCGCTGCAGAGGCCAAGGAACCAGTGCGTCGATTACCCGAGGAA
GCTATACGCCGACGCCCCGACGAAGCCGACCGCCTACGATCCGAGGAGCC
CGTTGCCGCCAGGAAGCCAACAACTGCTCCTGCTGCTCAACCCGTACAGA
CCCGGCGCACTTCCACCTCCTCGGGGTCTGAAAGGAAAGTAGTGGAGCCC
TTGAGGAAGCCAGAAACCATTGTTGAGCAACCGGCTTCCTCGAAGCGCGC
TGATCGAGAGGAGAATTATCTTAAGGTCAACTCCCTGATTGTCCTAGAGT
CCGATGAAGAAGAGGACGAGCAGCTAGTCCAGGCTGCAGATCTGGTGGAG
CAGGAGCACGCGGCCAG
MXO52604.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5581-PA | 1275 | Ote-RA | 1..659 | 9..667 | 3295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ote-RA | 1571 | CG5581-RA | 99..757 | 9..667 | 3295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18276421..18277079 | 667..9 | 3295 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:27:55 has no hits.
MXO52604.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:25 Download gff for
MXO52604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5581-PA | 1..659 | 9..667 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:47 Download gff for
MXO52604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ote-RA | 93..757 | 1..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:09 Download gff for
MXO52604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ote-RA | 93..757 | 1..667 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:09 Download gff for
MXO52604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18276421..18277085 | 1..667 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:47 Download gff for
MXO52604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14163926..14164590 | 1..667 | 99 | | Minus |
