MXO52605.5prime Sequence
824 bp (769 high quality bases) assembled on 2007-04-02
> MXO52605.5prime
CAGTCGACATGCCCGTGCTGCCGATGCCACCACTCATGCAGAACGCCGTG
GAGCCGATGCAAGTGGACATCGCGCCGCCGAACGAGGACAACGAAAACAA
CGAGGAGCAGCAGATTGTGGTGGAGAACCCCAGCATCGATCTCGAAGTGT
ACGCCAACCAATATGCCGGGATCGTGCGGCTCCATCGCCTAATTTATGTG
GCGGACGTCTGCCCGGTTTTAGCCGTGGAGGCTCTGAAAATGGCCATTAC
TTACGTTCAAACCACCTACAACGTAAATCTCTACCAAGTGCTGCACAAGC
GCTTGAGTGATCTAAACGCTGGAAATGCGCCTGCGCCACCAGCAAATGCT
GGCGGAGATCAGGCAGGAGCAGCGGCTCCCGGTCCCCTGGCAGCTGCTCC
CCTTCCGGATATCGCGGCACAACCTGTGGCTCAGGCTCAAGGACAGGCTC
AACCCGCTGTCGAAAAGGATGCCTTCGCCTACGATGCCGCTTGGGTAGAC
ACCAAGATGAAGAAGGCGGCTCTTAAGCTGGAGAAACTGGACTCAGACCT
CAAGAACTACAAGTCCAATTCGATCAAGGAGAGCATCCGGAGGGGCCACG
ATGACCTGGCTGACCACTACCTCAGTTGTGGCGACCTCACCAATGCCCTG
AAGTGCTATTCTCGGGCCAGAGACTACTGCACTAGTGGCAAGCATGTGGT
AAACATGTGCCTTAACGTGATCAAGGTGTCAATTTATCTCCAGAATTGGG
CCCATGTGATGAGCTACATATCCAAGGCGGAAAGCACCCCCGACTTCGCC
GAGGGCTCCAAGGAGGCTAATGCC
MXO52605.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:10:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3889-PA | 1578 | CSN1b-RA | 1..816 | 9..824 | 4055 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:00:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CSN1b-RA | 1802 | CG3889-RA | 137..952 | 9..824 | 4065 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:00:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18903907..18904691 | 824..40 | 3910 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:00:46 has no hits.
MXO52605.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:26 Download gff for
MXO52605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3889-PA | 1..816 | 9..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:37 Download gff for
MXO52605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1b-RA | 133..952 | 1..824 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:14 Download gff for
MXO52605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1b-RA | 133..952 | 1..824 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:14 Download gff for
MXO52605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18903907..18904689 | 42..824 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:37 Download gff for
MXO52605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18897007..18897789 | 42..824 | 99 | <- | Minus |
