MXO52611.5prime Sequence
759 bp (759 high quality bases) assembled on 2007-04-02
> MXO52611.5prime
CAGTCGACATGCCTAACGACACTGCGGTAAAGGTGCAGGAGTACAAGGAC
TCGTTGATCCTCAAGGCAGAGCTGCTAATCACCAAGGGGTTCCCGGAGAA
TATCGTCCGGCTGAACGAGCTGCTGGCCACGCCGATCTTCAACGAGCGCA
ACTTCGAAGAAGTGCACCAGGACCTCAACATCCCGGTCCTGCCGCCTCTC
CTGGTTAAAAACGAGTTGGAGGATCGTGACAGTCTGCCCACCAAGCGCCA
GCGCGTGGATGTCATCGTCTCTGGGCAGCCTGTCATGGGTCTGCCCGCCG
GTACAGTGCCGTGCAACAAGCCGCTCTGCGAGATGATCAAGGTCGTCAAG
CCTATCATCAGGAAGCTTGTGGAGGATTCCAATCTACTTAAGATGTGGAT
CTCCTTTATGATACCCAAGATCGAGGATGGCAACAACTTTGGCGTCTCCA
TTCAAGAGGACACGCTTGCCGAAATTCAAACTGTGGAATCCGAGGCGGCC
GCCTTCTTTGACCAGATATCGCGCTATTTCTTGTCGCGCGCCAAGGTGGT
GTCCAAGGTGGCCAAGTATCCGCACATCGATGATTATCGGCGCGCAGTCG
TCGAACTTGACGAGAAGGAGTACCTCAGCTTGTGGCTGGTCGTTTGTGAG
GTCCGCAATCGCTACTCCTCGCTGCACGACATTGTTATTAAGAACCTCGA
GAAGCTAAAGAAGCCGCGCTCCTCAAATACCGAAAGCCTGTATGCAAGCT
TTCTAGACC
MXO52611.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1591-PA | 738 | REG-RA | 1..735 | 9..743 | 3650 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| REG-RB | 1830 | CG1591-RB | 204..942 | 5..743 | 3665 | 99.7 | Plus |
| REG-RA | 1370 | CG1591-RA | 177..915 | 5..743 | 3665 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13212585..13212958 | 5..378 | 1840 | 99.5 | Plus |
| X | 23542271 | X | 13213156..13213520 | 379..743 | 1825 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:10:06 has no hits.
MXO52611.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:28 Download gff for
MXO52611.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1591-PA | 1..738 | 9..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:02 Download gff for
MXO52611.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| REG-RA | 173..921 | 1..750 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:29 Download gff for
MXO52611.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| REG-RA | 173..921 | 1..750 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:29 Download gff for
MXO52611.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13212581..13212958 | 1..378 | 98 | -> | Plus |
| X | 13213156..13213526 | 379..750 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:02 Download gff for
MXO52611.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13106614..13106991 | 1..378 | 98 | -> | Plus |
| arm_X | 13107189..13107559 | 379..750 | 99 | | Plus |
